RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ADGRG2Q8IZP9 1017 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 LEMD2Q8NC56 503 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 OR2A12Q8NGT7 310 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 ZSWIM3Q96MP5 696 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 LATS2Q9NRM7 1088 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 SPATS2LQ9NUQ6 558 aaKnown RBP19.84■□□□□ 0.77
USP39-204ENST00000409766 OARD1Q9Y530 152 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 BBIP1A8MTZ0 92 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 TRIM24O15164 1050 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 OR4F21O95013 312 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 NSG1P42857 185 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 NME5P56597 212 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 ERVPABLB-1P60509 514 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 RFLNAQ6ZTI6 216 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 SPATA19Q7Z5L4 167 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 UBE2Q1Q7Z7E8 422 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 KIAA0907Q7Z7F0 614 aaPredicted RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 RETREG3Q86VR2 466 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 FAM156AQ8NDB6 213 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 BHLHE22Q8NFJ8 381 aaPredicted RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 ROPN1LQ96C74 230 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 ASB9Q96DX5 294 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 ACOX2Q99424 681 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 ECSITQ9BQ95 431 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 FAM126AQ9BYI3 521 aaPredicted RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 NOL11Q9H8H0 719 aaKnown RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 SPAG4Q9NPE6 437 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 MRPL40Q9NQ50 206 aaKnown RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 PRKAG2Q9UGJ0 569 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 PTBP2Q9UKA9 531 aaKnown RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 PSMD13Q9UNM6 376 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 GPR45Q9Y5Y3 372 aa19.83■□□□□ 0.77
USP39-204ENST00000409766 PRRC2BQ5JSZ5 2229 aaKnown RBP19.83■□□□□ 0.77
USP39-204ENST00000409766 WASH3PC4AMC7 463 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 DIO3P55073 304 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 ATP13A5Q4VNC0 1218 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 LETMD1Q6P1Q0 360 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 GOLGA7Q7Z5G4 137 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 SPRED2Q7Z698 418 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 PLPP6Q8IY26 295 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 CDYL2Q8N8U2 506 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 MYLIPQ8WY64 445 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 CDK15Q96Q40 435 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 CCT7Q99832 543 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 NSUN3Q9H649 340 aaKnown RBP19.83■□□□□ 0.76
USP39-204ENST00000409766 ZDHHC3Q9NYG2 299 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 SUCOQ9UBS9 1254 aaKnown RBP19.83■□□□□ 0.76
USP39-204ENST00000409766 CROTQ9UKG9 612 aa19.83■□□□□ 0.76
USP39-204ENST00000409766 A0A1W2PQ67 120 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 NR5A2O00482 541 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 CASQ2O14958 399 aaPredicted RBP19.82■□□□□ 0.76
USP39-204ENST00000409766 S100BP04271 92 aaPredicted RBP19.82■□□□□ 0.76
USP39-204ENST00000409766 HNRNPA1P09651 372 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP39-204ENST00000409766 TCN1P20061 433 aaPredicted RBP19.82■□□□□ 0.76
USP39-204ENST00000409766 MRPL19P49406 292 aaKnown RBP19.82■□□□□ 0.76
USP39-204ENST00000409766 UBE3AQ05086 875 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 BLMHQ13867 455 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 ZFP1Q6P2D0 407 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 PSRC1Q6PGN9 363 aaPredicted RBP19.82■□□□□ 0.76
USP39-204ENST00000409766 GDPD4Q6W3E5 623 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 DCBLD1Q8N8Z6 715 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 OR2T11Q8NH01 316 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 PFDN4Q9NQP4 134 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 TMEM181Q9P2C4 612 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 MAP10Q9P2G4 905 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 B4GALT6Q9UBX8 382 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 CD300AQ9UGN4 299 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 WNT6Q9Y6F9 365 aa19.82■□□□□ 0.76
USP39-204ENST00000409766 LINC01553A4QN01 128 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 OR7A17O14581 309 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 TAPBPO15533 448 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 XYLBO75191 536 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 C1SP09871 688 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 TCF3P15923 654 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 CAPN3P20807 821 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 MRPS22P82650 360 aaKnown RBP19.81■□□□□ 0.76
USP39-204ENST00000409766 B4GALNT1Q00973 533 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 GTF2H2Q13888 395 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 TRIM25Q14258 630 aaKnown RBP19.81■□□□□ 0.76
USP39-204ENST00000409766 CRY1Q16526 586 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PHKG1Q16816 387 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 LRRC73Q5JTD7 316 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 ZDHHC20Q5W0Z9 365 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 LPCAT4Q643R3 524 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 GTF2H2CQ6P1K8 395 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 SCIMPQ6UWF3 145 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 LAYNQ6UX15 382 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PCYOX1LQ8NBM8 494 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PHOSPHO2Q8TCD6 241 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 DLG3Q92796 817 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PBXIP1Q96AQ6 731 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 KLHL32Q96NJ5 620 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 COPS8Q99627 209 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 SLC52A3Q9NQ40 469 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 ELOVL2Q9NXB9 296 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 MARK1Q9P0L2 795 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 ERVW-1Q9UQF0 538 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 ALPK3Q96L96 1907 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 IGLV3-16A0A075B6K0 115 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PRORSD1PA6NEY8 169 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms