RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 SEPHS2Q99611 448 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 VIPR1P32241 457 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 FOXN2P32314 431 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 PTGER3P43115 390 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 SEPHS1P49903 392 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 AGTR2P50052 363 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 TMEM115Q12893 351 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 OTUD1Q5VV17 481 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 ANKRD54Q6NXT1 300 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 USP53Q70EK8 1073 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 TMEFF1Q8IYR6 380 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 MYLK2Q9H1R3 596 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 VCXQ9H320 206 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 WDR41Q9HAD4 459 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 GDE1Q9NZC3 331 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 SCHIP1Q9P0W5 487 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 ZSCAN9O15535 394 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 KDM1AO60341 852 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 IPO13O94829 963 aaKnown RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 KLHL2O95198 593 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 C6P13671 934 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 CHIT1Q13231 466 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 CYP2A13Q16696 494 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 LIPMQ5VYY2 423 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 HTR3DQ70Z44 454 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 FAM160A2Q8N612 972 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 CEP70Q8NHQ1 597 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 OTUB2Q96DC9 234 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 PGAP3Q96FM1 320 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 SLC22A14Q9Y267 594 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 PSMD12O00232 456 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 CDH3P22223 829 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 CHI3L1P36222 383 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 CYLC2Q14093 348 aaPredicted RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 CYP51A1Q16850 503 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 PGBD5Q8N414 524 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 EIF1ADQ8N9N8 165 aaKnown RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 PCYOX1LQ8NBM8 494 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 VPS37AQ8NEZ2 397 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 VCX3BQ9H321 246 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 RAD18Q9NS91 495 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 PSD3Q9NYI0 1048 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 ANKRD6Q9Y2G4 727 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
SNX13-202ENST00000409604 SVILO95425 2214 aa11.25□□□□□ -0.61
SNX13-202ENST00000409604 AZIN1O14977 448 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ZNF682O95780 498 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 CAPN1P07384 714 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 BPIP17213 487 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 KELP23276 732 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 AKT2P31751 481 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SKOR1P84550 965 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SATB1Q01826 763 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 HYAL2Q12891 473 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 PDK4Q16654 411 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 TIGD2Q4W5G0 525 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 INO80DQ53TQ3 878 aaPredicted RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 CILP2Q8IUL8 1156 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 KCT2Q8NC54 265 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 LMX1AQ8TE12 382 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 TMEM174Q8WUU8 243 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 INPP5DQ92835 1189 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 KCNA7Q96RP8 456 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 KLHL20Q9Y2M5 609 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SLC27A6Q9Y2P4 619 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 PRRT4C9JH25 899 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ZW10O43264 779 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ITM2AO43736 263 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 IFNA16P05015 189 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 EEF1B2P24534 225 aaKnown RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 MPP2Q14168 576 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 LRRC23Q53EV4 343 aaPredicted RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 CEP97Q8IW35 865 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 DOK4Q8TEW6 326 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SETD7Q8WTS6 366 aaKnown RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 NECTIN4Q96NY8 510 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 PRPF18Q99633 342 aaKnown RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 IL21Q9HBE4 155 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 SGK2Q9HBY8 427 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 EVPLLA8MZ36 301 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 GMFGO60234 142 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ESR1P03372 595 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 RPN2P04844 631 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 GSSP48637 474 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 DMTNQ08495 405 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 MAP7Q14244 749 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ACSBG2Q5FVE4 666 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms