RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 C2orf81A6NN90 581 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 DDX3YO15523 660 aaKnown RBP18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 VCLP18206 1134 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 MC2RQ01718 297 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 KIF5AQ12840 1032 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 GPR18Q14330 331 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 DENND5AQ6IQ26 1287 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 DET1Q7L5Y6 550 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 PLXDC1Q8IUK5 500 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 BEND7Q8N7W2 519 aaPredicted RBP18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 RTP4Q96DX8 246 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 ZCCHC2Q9C0B9 1178 aaKnown RBP18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 APMAPQ9HDC9 416 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 POT1Q9NUX5 634 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 SMOXQ9NWM0 555 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 PSMD13Q9UNM6 376 aa18.93■□□□□ 0.62
SMARCB1-204ENST00000407422 C5orf60A6NFR6 353 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 RAB15P59190 212 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 CYP4F2P78329 520 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 NFE2L1Q14494 772 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 FNBP1LQ5T0N5 605 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 UBL4BQ8N7F7 174 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 OR13C4Q8NGS5 318 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 RSC1A1Q92681 617 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 CXorf40BQ96DE9 158 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 TGM7Q96PF1 710 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 R3HDM2Q9Y2K5 976 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 SRP72O76094 671 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 C9P02748 559 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 AMD1P17707 334 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 PBLDP30039 288 aaPredicted RBP18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 AKT1P31749 480 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 LEPRP48357 1165 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 XIAPP98170 497 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 DMPKQ09013 629 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 MICALCLQ6ZW33 695 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 SYCE1Q8N0S2 351 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 FAM71DQ8N9W8 422 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 C9orf72Q96LT7 481 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 TBL1YQ9BQ87 522 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 ASB8Q9H765 288 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 IMPACTQ9P2X3 320 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 PILRAQ9UKJ1 303 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 CAPN6Q9Y6Q1 641 aa18.92■□□□□ 0.62
SMARCB1-204ENST00000407422 TLN1Q9Y490 2541 aaKnown RBP18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 MIF4GDA9UHW6 222 aaKnown RBP18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 CCL22O00626 93 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 CAPN5O15484 640 aaPredicted RBP18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 KCNJ13O60928 360 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 MSH3P20585 1137 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 CDC25BP30305 580 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 ATP1A2P50993 1020 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 TMPRSS15P98073 1019 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 KLF1Q13351 362 aaPredicted RBP18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 LINC00303Q3SY05 128 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 KLHDC8BQ8IXV7 354 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 IL22RA1Q8N6P7 574 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 GPR150Q8NGU9 434 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 EXTL1Q92935 676 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 SPRY4Q9C004 299 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 FBXO8Q9NRD0 319 aa18.91■□□□□ 0.62
SMARCB1-204ENST00000407422 GOLGA6L9A6NEM1 432 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 KIF1CO43896 1103 aaKnown RBP18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 METTL18O95568 372 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 ANKRD34CP0C6C1 535 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 HALP42357 657 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 ZNF140P52738 457 aaPredicted RBP18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 GDF10P55107 478 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 RPE65Q16518 533 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 LONRF2Q1L5Z9 754 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 CACNA2D3Q8IZS8 1091 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 EXD3Q8N9H8 876 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 TEFMQ96QE5 360 aaKnown RBP18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 FAM96AQ9H5X1 160 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 ARNT2Q9HBZ2 717 aa18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 SIDT1Q9NXL6 827 aaKnown RBP18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 DNMT3AQ9Y6K1 912 aaPredicted RBP18.9■□□□□ 0.62
SMARCB1-204ENST00000407422 SGTAO43765 313 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 RAD1O60671 282 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 CRTAMO95727 393 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 LIFP15018 202 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 CAPZBP47756 277 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 SEPHS1P49903 392 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 METRNLQ641Q3 311 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 KCTD11Q693B1 232 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 XKR5Q6UX68 686 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 CEACAM20Q6UY09 585 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 ARHGEF18Q6ZSZ5 1173 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 TIPARPQ7Z3E1 657 aaKnown RBP18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 RBM12BQ8IXT5 1001 aaKnown RBP18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 ZSCAN1Q8NBB4 408 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 TTC13Q8NBP0 860 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 RNF31Q96EP0 1072 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 HES6Q96HZ4 224 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 FAM8A1Q9UBU6 413 aa18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 CFAP20Q9Y6A4 193 aaKnown RBP18.89■□□□□ 0.62
SMARCB1-204ENST00000407422 PIKFYVEQ9Y2I7 2098 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms