RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 HIF1AQ16665 826 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.06□□□□□ -0.96
NUP43-204ENST00000403890 PRAMEF17Q5VTA0 474 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 B3GNTL1Q67FW5 361 aaPredicted RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 ISM2Q6H9L7 571 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 KLHL35Q6PF15 583 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 XKRXQ6PP77 449 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 FAM180AQ6UWF9 173 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 FAM198BQ6UWH4 519 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ABRAXAS1Q6UWZ7 409 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 NDUFAF2Q8N183 169 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 PIH1D2Q8WWB5 315 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 NELFBQ8WX92 580 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 SNX21Q969T3 373 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 CXorf40BQ96DE9 158 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 CCDC120Q96HB5 630 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 NUDCD1Q96RS6 583 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 CD180Q99467 661 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 MAP3K3Q99759 626 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 MCCC2Q9HCC0 563 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 FZD10Q9ULW2 581 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 PADI2Q9Y2J8 665 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 CSAG2Q9Y5P2 127 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ABCA4P78363 2273 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 FAM221AA4D161 298 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 GTPBP10A4D1E9 387 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 TLCD2A6NGC4 264 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 CFAP99D6REC4 459 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 DFFAO00273 331 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 CCL21O00585 134 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 LDB2O43679 373 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 MTA2O94776 668 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 KRT3P12035 628 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 BRAFP15056 766 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ZNF8P17098 575 aaPredicted RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 HSPA9P38646 679 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 STC1P52823 247 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ART1P52961 327 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 AIF1P55008 147 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 KCNK10P57789 538 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 NOMO3P69849 1222 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 KRT85P78386 507 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 TLE4Q04727 773 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 PKP1Q13835 747 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ZNF169Q14929 603 aaPredicted RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 PLCL1Q15111 1095 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 SEPT7Q16181 437 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 DNTTIP2Q5QJE6 756 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 TMTC4Q5T4D3 741 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 DUS1LQ6P1R4 473 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 ARHGAP36Q6ZRI8 547 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ARHGAP12Q8IWW6 846 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 RAVER1Q8IY67 606 aaKnown RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 TMEM151AQ8N4L1 468 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 BCORP1Q8N888 145 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 DHRS4Q9BTZ2 278 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 SIX2Q9NPC8 291 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 FAM207AQ9NSI2 230 aaPredicted RBP9.05□□□□□ -0.96
NUP43-204ENST00000403890 OLAHQ9NV23 265 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ATXN10Q9UBB4 475 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 SLC23A2Q9UGH3 650 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 NEU2Q9Y3R4 380 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 ATP6V1DQ9Y5K8 247 aa9.05□□□□□ -0.96
NUP43-204ENST00000403890 JMJD1CQ15652 2540 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 TRGV8A0A0C4DH27 118 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 OR52A4PA6NMU1 304 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 C9J4A7 227 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 PCDH17O14917 1159 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 KLF7O75840 302 aaPredicted RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 ZBTB11O95625 1053 aaPredicted RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 FGFR1OPO95684 399 aaKnown RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 MMEP08473 750 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 PDHA1P08559 390 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 ZNF7P17097 686 aaPredicted RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 GPD1P21695 349 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 MMP8P22894 467 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 RPL10P27635 214 aaKnown RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 TLR1Q15399 786 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 INSCQ1MX18 579 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 PTCHD3Q3KNS1 767 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 RALGPS1Q5JS13 557 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 WDR59Q6PJI9 974 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 TMEM207Q6UWW9 146 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 CREBRFQ8IUR6 639 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 CEP97Q8IW35 865 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 PGBD5Q8N414 524 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 TTC30BQ8N4P2 665 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 ZNF599Q96NL3 588 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 GBP5Q96PP8 586 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 SMIM14Q96QK8 99 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 WDR24Q96S15 920 aa9.04□□□□□ -0.96
NUP43-204ENST00000403890 DPH2Q9BQC3 489 aaPredicted RBP9.04□□□□□ -0.96
NUP43-204ENST00000403890 OR2AG1Q9H205 316 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms