RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MATN3O15232 486 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CPNE3O75131 537 aaKnown RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RNF8O76064 485 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RAB40ALP0C0E4 278 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCK1P35558 622 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ARSEP51690 589 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 VAV2P52735 878 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF135P52742 658 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TUBB4BP68371 445 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SLC25A11Q02978 314 aaKnown RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ACY1Q03154 408 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CDK18Q07002 472 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GALNT2Q10471 571 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GALNT3Q14435 633 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RPE65Q16518 533 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ANO6Q4KMQ2 910 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ANKRD20A8PQ5CZ79 823 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF569Q5MCW4 686 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NCBP2-AS2Q69YL0 99 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SP5Q6BEB4 398 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TMC3Q7Z5M5 1100 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LRRTM4Q86VH4 590 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 IQCKQ8N0W5 287 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BTBD6Q96KE9 485 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TRIB3Q96RU7 358 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NLNQ9BYT8 704 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF552Q9H707 407 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KCND1Q9NSA2 647 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SNX7Q9UNH6 387 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SHOC2Q9UQ13 582 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ENTPD4Q9Y227 616 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ANKHD1Q8IWZ3 2542 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DDX3XO00571 662 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GPR39O43194 453 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZG16O60844 167 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MTA2O94776 668 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FTLP02792 175 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BPIP17213 487 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ARL4AP40617 200 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CD86P42081 329 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ARCN1P48444 511 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KPNA2P52292 529 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CTSCP53634 463 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 UBE2HP62256 183 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SLC10A2Q12908 348 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PTCHD3Q3KNS1 767 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ATP13A4Q4VNC1 1196 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DUS1LQ6P1R4 473 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF571Q7Z3V5 609 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TMEM126BQ8IUX1 230 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SLC34A3Q8N130 599 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TTC30BQ8N4P2 665 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TRAM1L1Q8N609 369 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CNTD1Q8N815 330 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 OR1L3Q8NH93 324 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ENOX1Q8TC92 643 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LRFN5Q96NI6 719 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FANCLQ9NW38 375 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PSMD13Q9UNM6 376 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RPL26L1Q9UNX3 145 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 B3GNT3Q9Y2A9 372 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TTLL3Q9Y4R7 772 aa11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCM1Q15154 2024 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TLCD2A6NGC4 264 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LGALS16A8MUM7 142 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 LRRTM2O43300 516 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 HNRNPRO43390 633 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CNOT3O75175 753 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KLF7O75840 302 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CDK14O94921 469 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 IDSP22304 550 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DCDC1P59894 354 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 HSD11B2P80365 405 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PAFAH1B3Q15102 231 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZRSR2Q15696 482 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ATP13A5Q4VNC0 1218 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BOLA3Q53S33 107 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 VWA5B1Q5TIE3 1220 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF385CQ66K41 422 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MED25Q71SY5 747 aa11.6□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms