RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 CANT1Q8WVQ1 401 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 C19orf43Q9BQ61 176 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 EFHD1Q9BUP0 239 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 COQ10BQ9H8M1 238 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 PIDD1Q9HB75 910 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 INTS6Q9UL03 887 aaKnown RBP16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 PCDHGB4Q9UN71 923 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 PCDHGB5Q9Y5G0 923 aa16.72■□□□□ 0.27
DNMT3A-205ENST00000402667 TRBV5-4A0A0C4DH59 114 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 NRG2O14511 850 aaPredicted RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 OR7A17O14581 309 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 TRIM16O95361 564 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CAPN1P07384 714 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 ACRV1P26436 265 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CA8P35219 290 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 ARL1P40616 181 aaPredicted RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 GRIA2P42262 883 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CCNHP51946 323 aaPredicted RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 FOXM1Q08050 763 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CHRNA6Q15825 494 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 PDCD4Q53EL6 469 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 HMBOX1Q6NT76 420 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 AMIGO2Q86SJ2 522 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CMTR2Q8IYT2 770 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 FIBCD1Q8N539 461 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 METTL6Q8TCB7 284 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CNBD2Q96M20 576 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 LRRC3Q9BY71 257 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 ATP13A3Q9H7F0 1226 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 EGFL7Q9UHF1 273 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CNOT6Q9ULM6 557 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 ZNF510Q9Y2H8 683 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 PCDHA9Q9Y5H5 950 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 GLYATL1P3A0A0U1RQE8 302 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 RAD51BO15315 384 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 SYNCRIPO60506 623 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 BAIAP3O94812 1187 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 IGSF6O95976 241 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 S100BP04271 92 aaPredicted RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CNPP09543 421 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 GJA1P17302 382 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 RGS4P49798 205 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 GTF2H2Q13888 395 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 NFYCQ13952 458 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 NRF1Q16656 503 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 ATP6AP1LQ52LC2 224 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 PAGE3Q5JUK9 113 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 GTF2H2CQ6P1K8 395 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 TMC8Q8IU68 726 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 FNDC5Q8NAU1 212 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 PDPRQ8NCN5 879 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 TRIM8Q9BZR9 551 aa16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 NSUN3Q9H649 340 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-205ENST00000402667 CCDC154A6NI56 674 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 GUCA1CO95843 209 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 HTR6P50406 440 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 BNIP2Q12982 314 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 GK3PQ14409 553 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 LIN52Q52LA3 116 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 MTX3Q5HYI7 312 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 IRAK1BP1Q5VVH5 260 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TSPAN33Q86UF1 283 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 SPPL2CQ8IUH8 684 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 MYO1HQ8N1T3 1032 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 SFRP1Q8N474 314 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 OR4F6Q8NGB9 312 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 OR2AP1Q8NGE2 309 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TMEM125Q96AQ2 219 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TRIM54Q9BYV2 358 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 ARMC1Q9NVT9 282 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 ZIM2Q9NZV7 527 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 CRLS1Q9UJA2 301 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 C7orf72A4D263 438 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 AQP12BA6NM10 295 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TAPBPO15533 448 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TIPRLO75663 272 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 GLUD1P00367 558 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 DGKAP23743 735 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 IL12AP29459 219 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 CTSOP43234 321 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 SEMG2Q02383 582 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 GPRC6AQ5T6X5 926 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 LYPLAL1Q5VWZ2 237 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 IL27RAQ6UWB1 636 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 AQP12AQ8IXF9 295 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 TMEM199Q8N511 208 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 DNAJB14Q8TBM8 379 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 FAM110BQ8TC76 370 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 PROKR1Q8TCW9 393 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 VOPP1Q96AW1 172 aa16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 PPWD1Q96BP3 646 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 FAM126AQ9BYI3 521 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 CCM2LQ9NUG4 571 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-205ENST00000402667 ELOVL2Q9NXB9 296 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms