RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HPRP00739 348 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 MAP2K4P45985 399 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 GSSP48637 474 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 EMX1Q04741 257 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 SELENBP1Q13228 472 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 FXNQ16595 210 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 ATP6AP1LQ52LC2 224 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 XKR4Q5GH76 650 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 GALNT7Q86SF2 657 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 BLOC1S5Q8TDH9 187 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 FAR1Q8WVX9 515 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 VMP1Q96GC9 406 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 SMARCD1Q96GM5 515 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 ZNF599Q96NL3 588 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 SCHIP1Q9P0W5 487 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 INVSQ9Y283 1065 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 FAM92AA1XBS5 289 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 MEIS3P2A8K0S8 358 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 CDC7O00311 574 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 LDB2O43679 373 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 CHEK2O96017 543 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 MMP2P08253 660 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 GGT1P19440 569 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 ARL1P40616 181 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 ERVK-8P63133 956 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 PAQR3Q6TCH7 311 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 CCDC80Q76M96 950 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 ZFAND4Q86XD8 727 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 MINDY2Q8NBR6 621 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 OR13C4Q8NGS5 318 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 RHEBL1Q8TAI7 183 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 FEM1AQ9BSK4 669 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 TFB2MQ9H5Q4 396 aaKnown RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 MAGEE1Q9HCI5 957 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 UXTQ9UBK9 157 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 LOC100130705A0A1B0GUX0 176 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 NPEPPSL1A6NEC2 478 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 GSTA4O15217 222 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 IRAK2O43187 625 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 KERAO60938 352 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 PGFP49763 221 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 PPP2R2BQ00005 443 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 PRKG2Q13237 762 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 DGCR6Q14129 220 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 C6orf136Q5SQH8 315 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 CCDC81Q6ZN84 652 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 CDYL2Q8N8U2 506 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 CGREF1Q99674 301 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 HGH1Q9BTY7 390 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ANKMY1Q9P2S6 941 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 GALPQ9UBC7 116 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 U3KQV3 271 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 TRPM7Q96QT4 1865 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 E9PAM4 449 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 RHOBTB1O94844 696 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 GABARAPO95166 117 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 PEX11BO96011 259 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 CHRNA1P02708 482 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ISL1P61371 349 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 IL5RAQ01344 420 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 SF3B4Q15427 424 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■■■■■ 42.4
APOB-202ENST00000399256 DGUOKQ16854 277 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 TMEM179BQ7Z7N9 219 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 STAG3L4Q8TBR4 150 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 SLC47A1Q96FL8 570 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ZIM2Q9NZV7 527 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 DNAJB9Q9UBS3 223 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 OR4F21O95013 312 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 UROSP10746 265 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 CYP2C18P33260 490 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 TGFBR1P36897 503 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 NCS1P62166 190 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ARTNQ5T4W7 220 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 FAM126BQ8IXS8 530 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 RTL3Q8N8U3 475 aaKnown RBP13.81□□□□□ -0.2
APOB-202ENST00000399256 MCOLN3Q8TDD5 553 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 EMID1Q96A84 441 aaPredicted RBP13.81□□□□□ -0.2
APOB-202ENST00000399256 NOL6Q9H6R4 1146 aaKnown RBP13.81□□□□□ -0.2
APOB-202ENST00000399256 AGO3Q9H9G7 860 aaKnown RBP13.81□□□□□ -0.2
APOB-202ENST00000399256 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 ASB1Q9Y576 335 aa13.81□□□□□ -0.2
APOB-202ENST00000399256 MMP3P08254 477 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 HOXC13P31276 330 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 FMO4P31512 558 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms