RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SLC39A8Q9C0K1 460 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 SARS2Q9NP81 518 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 RASSF1Q9NS23 344 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TMEM30AQ9NV96 361 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 FAM118AQ9NWS6 357 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ERVK-18Q9QC07 812 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 ABCD2Q9UBJ2 740 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 PIN4Q9Y237 131 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
PTCHD4-202ENST00000398738 TCRBV5S2A0A599 114 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ASPDHA6ND91 283 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ASB14A6NK59 587 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 BBIP1A8MTZ0 92 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 KATNA1O75449 491 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 SLC22A3O75751 556 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 SOAT2O75908 522 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 CYBBP04839 570 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 PIK3CGP48736 1102 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ALDH3A2P51648 485 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 GP2P55259 537 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 PSMA6P60900 246 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 COPZ1P61923 177 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 TRIP4Q15650 581 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 AASDHQ4L235 1098 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ATP6AP1LQ52LC2 224 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 PLD3Q8IV08 490 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 MICU2Q8IYU8 434 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 CHDHQ8NE62 594 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 MCOLN3Q8TDD5 553 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 KCNN1Q92952 543 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 MAGED4Q96JG8 741 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ZFP42Q96MM3 310 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 PALMDQ9NP74 551 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 DDX28Q9NUL7 540 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 PAK1IP1Q9NWT1 392 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 GTF2IRD1Q9UHL9 959 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ADAMTS5Q9UNA0 930 aa9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 CAB39Q9Y376 341 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-202ENST00000398738 ARID2Q68CP9 1835 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 SMIM28A0A1B0GU29 152 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 A0A1W2PP18 115 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 MFN2O95140 757 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 LGALS2P05162 132 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 ALPLP05186 524 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 UGT2B4P06133 528 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TRPC1P48995 793 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GMPSP49915 693 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 POLR2JP52435 117 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 SMN1Q16637 294 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 FSCN1Q16658 493 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 UBE2UQ5VVX9 321 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 UGT3A1Q6NUS8 523 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 HACD2Q6Y1H2 254 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 PAQR9Q6ZVX9 377 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TAS2R42Q7RTR8 314 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 C14orf80Q86SX3 495 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 FAM126BQ8IXS8 530 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 CRYBG2Q8N1P7 616 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TUBA1CQ9BQE3 449 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 RIBC2Q9H4K1 309 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GPN2Q9H9Y4 310 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 CARS2Q9HA77 564 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 AMBNQ9NP70 447 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GALPQ9UBC7 116 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 COL11A2P13942 1736 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GOT2P00505 430 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 DPEP1P16444 411 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TAF6P49848 677 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 CSRP3P50461 194 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 EMX1Q04741 257 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GTF2H3Q13889 308 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 ATAD3BQ5T9A4 648 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 SULT1C3Q6IMI6 304 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 PLEKHG7Q6ZR37 379 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 USP51Q70EK9 711 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 SPATC1Q76KD6 591 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GATAD2AQ86YP4 633 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 OR10A6Q8NH74 314 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 FKBP10Q96AY3 582 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TSPAN17Q96FV3 270 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 WDR12Q9GZL7 423 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TP63Q9H3D4 680 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 SMOC2Q9H3U7 446 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 VTA1Q9NP79 307 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 DNMT3BQ9UBC3 853 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 RNF112Q9ULX5 631 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 TMEM98Q9Y2Y6 226 aa9.77□□□□□ -0.85
PTCHD4-202ENST00000398738 WDR81Q562E7 1941 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 MGAMO43451 1857 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 TRIM64A6NGJ6 449 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 MYO1GB0I1T2 1018 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 C19orf81C9J6K1 198 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 DIRAS1O95057 198 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ADH1AP07327 375 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 DBTP11182 482 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms