RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SPTBN2O15020 2390 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 VPS26AO75436 327 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 AP2A2O94973 939 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 RALBP11234 206 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SDHBP21912 280 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 HNRNPA2B1P22626 353 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 CLCN7P51798 805 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 IRF9Q00978 393 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 MPP2Q14168 576 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 STPG1Q5TH74 334 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM207Q6UWW9 146 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 CDHR3Q6ZTQ4 885 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 RAPH1Q70E73 1250 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 ADGRG6Q86SQ4 1221 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 PLD6Q8N2A8 252 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 RASGEF1AQ8N9B8 481 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 GIMAP7Q8NHV1 300 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 FAM136AQ96C01 138 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 GPR21Q99679 349 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC30A3Q99726 388 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 MYOCQ99972 504 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 LGR4Q9BXB1 951 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC13A1Q9BZW2 595 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TRIM39Q9HCM9 518 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 TLK1Q9UKI8 766 aa16.7■□□□□ 0.26
TSPAN4-205ENST00000397406 A0A087X1B8 175 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM120BA0PK00 339 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 LNP1A1A4G5 178 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 COPEO14579 308 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 FSBPO95073 299 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 TOP3BO95985 862 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 OR56A5P0C7T3 313 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 CRHR1P34998 444 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC18A1P54219 525 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 ARMCX6Q7L4S7 300 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 DET1Q7L5Y6 550 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 CCDC91Q7Z6B0 441 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 CENPLQ8N0S6 344 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 DEFB119Q8N690 84 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 CD200R1Q8TD46 325 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 FUBP1Q96AE4 644 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 BIRC7Q96CA5 298 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 SGF29Q96ES7 293 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 SELENOSQ9BQE4 189 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 ZCCHC2Q9C0B9 1178 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 WDR26Q9H7D7 661 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 GPAMQ9HCL2 828 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 KCNK9Q9NPC2 374 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 ATXN10Q9UBB4 475 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 ANKRD6Q9Y2G4 727 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 ACOT9Q9Y305 439 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 DHRS7Q9Y394 339 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 OR1A2Q9Y585 309 aa16.69■□□□□ 0.26
TSPAN4-205ENST00000397406 POM121BA6NF01 834 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 E5RI56 91 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 CDX4O14627 284 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 VEGFDO43915 354 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 DNAJC6O75061 913 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 GLRA3O75311 464 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 GSTA1P08263 222 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 COL6A2P12110 1019 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 ZNF37AP17032 561 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 CHRM3P20309 590 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 DHPSP49366 369 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 CTSCP53634 463 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 IRX4P78413 519 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 DLG1Q12959 904 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 PDAP1Q13442 181 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 SIDT2Q8NBJ9 832 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 FAM76AQ8TAV0 307 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 DENND1AQ8TEH3 1009 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 ANKRD49Q8WVL7 239 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 BMFQ96LC9 184 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 UBXN10Q96LJ8 280 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 ORAI3Q9BRQ5 295 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 APOOQ9BUR5 198 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 PCED1AQ9H1Q7 454 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 OR2AG1Q9H205 316 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 LATS2Q9NRM7 1088 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 DCDC2Q9UHG0 476 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 LRP4O75096 1905 aa16.68■□□□□ 0.26
TSPAN4-205ENST00000397406 OR2AG2A6NM03 316 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 QSOX1O00391 747 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 FPGTO14772 594 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 NDUFS2O75306 463 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 CDK14O94921 469 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 MYCLP1P12525 358 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 ITGB6P18564 788 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 AKT2P31751 481 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 NUDT1P36639 197 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC26A3P40879 764 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 CCT5P48643 541 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 PRLHRP49683 370 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms