RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FRA10AC1Q70Z53 315 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 SNX20Q7Z614 316 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 ITIH5Q86UX2 942 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TMC8Q8IU68 726 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 TMEM125Q96AQ2 219 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 LRRC3Q9BY71 257 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 ELOVL2Q9NXB9 296 aa16.34■□□□□ 0.21
TRIM39-205ENST00000396551 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.33■□□□□ 0.21
TRIM39-205ENST00000396551 ENO4A6NNW6 628 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 A8MX80 341 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 HSPA8P11142 646 aaKnown RBP16.33■□□□□ 0.21
TRIM39-205ENST00000396551 MYBPC1Q00872 1141 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 PDCD4Q53EL6 469 aaKnown RBP16.33■□□□□ 0.21
TRIM39-205ENST00000396551 HTR3DQ70Z44 454 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 ADAMTSL2Q86TH1 951 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 SFRP1Q8N474 314 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 PIP4K2CQ8TBX8 421 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 ACDQ96AP0 544 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 TOX2Q96NM4 488 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 SLC29A1Q99808 456 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 SLC2A11Q9BYW1 496 aa16.33■□□□□ 0.21
TRIM39-205ENST00000396551 LSM7Q9UK45 103 aaKnown RBP16.33■□□□□ 0.21
TRIM39-205ENST00000396551 GIPC1O14908 333 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 TAPBPO15533 448 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 FFAR2O15552 330 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 BAIAP3O94812 1187 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 CKMP06732 381 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 CAPN1P07384 714 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 GJA1P17302 382 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 LAG3P18627 525 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 CSNK1DP48730 415 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 KCNK10P57789 538 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 SEMG2Q02383 582 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 FOXM1Q08050 763 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 TSPAN33Q86UF1 283 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 OR4F6Q8NGB9 312 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 HBEGFQ99075 208 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 SLAMF8Q9P0V8 285 aa16.33■□□□□ 0.2
TRIM39-205ENST00000396551 MYOFQ9NZM1 2061 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 DOCK6Q96HP0 2047 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 EEDO75530 441 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SLC22A3O75751 556 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SLC25A14O95258 325 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ACRV1P26436 265 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 GTF2H2Q13888 395 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 NFYCQ13952 458 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CHRNA6Q15825 494 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 RABL3Q5HYI8 236 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 IRAK1BP1Q5VVH5 260 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 GTF2H2CQ6P1K8 395 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SPPL2CQ8IUH8 684 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CPXM2Q8N436 756 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 PDPRQ8NCN5 879 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 NSUN3Q9H649 340 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ARMC1Q9NVT9 282 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 GNPTGQ9UJJ9 305 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ZFC3H1O60293 1989 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SYNCRIPO60506 623 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 HSPA13P48723 471 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 PLEKHG6Q3KR16 790 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 DNAJB14Q8TBM8 379 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 PROKR1Q8TCW9 393 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ABCB8Q9NUT2 735 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 TGM5O43548 720 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SOCS5O75159 536 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 TRIM16O95361 564 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CNPP09543 421 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ITGALP20701 1170 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 POLR2JP52435 117 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 SLC7A9P82251 487 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 TRAF3Q13114 568 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 LCN8Q6JVE9 175 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 TMEM199Q8N511 208 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 METTL6Q8TCB7 284 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 MRPS31Q92665 395 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CIB1Q99828 191 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 PTBP2Q9UKA9 531 aaKnown RBP16.32■□□□□ 0.2
TRIM39-205ENST00000396551 ATP11BQ9Y2G3 1177 aa16.32■□□□□ 0.2
TRIM39-205ENST00000396551 GLYATL1P3A0A0U1RQE8 302 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 GUCA1CO95843 209 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 GLUD1P00367 558 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 HSPA7P48741 367 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 MPPE1Q53F39 396 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 IL27RAQ6UWB1 636 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 FIBINQ8TAL6 211 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 TRIM54Q9BYV2 358 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 ZIM2Q9NZV7 527 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 APPL1Q9UKG1 709 aa16.31■□□□□ 0.2
TRIM39-205ENST00000396551 TNPO3Q9Y5L0 923 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms