RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FOLR1P15328 257 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 ZFXP17010 805 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 DRG2P55039 364 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 DNTTIP2Q5QJE6 756 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 LDLRAP1Q5SW96 308 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 ZFYVE27Q5T4F4 411 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 ZNF517Q6ZMY9 492 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 GDAP1Q8TB36 358 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 SYTL2Q9HCH5 934 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 KCND1Q9NSA2 647 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 PRRC2CQ9Y520 2896 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 A0A087X0T9 212 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 UBA6A0AVT1 1052 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ENO4A6NNW6 628 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 CEACAM4O75871 244 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 DNAJB5O75953 348 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 TIAF1O95411 115 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ZBTB11O95625 1053 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 SERPINC1P01008 464 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 EPOP01588 193 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 RAB40ALP0C0E4 278 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 FAM228BP0C875 321 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 KDELR1P24390 212 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 GJC1P36383 396 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 TNNT3P45378 269 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 UQCRFS1P47985 274 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 CCL11P51671 97 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ZBED6P86452 979 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ZBTB17Q13105 803 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 PLCL1Q15111 1095 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ANO6Q4KMQ2 910 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 ATP13A5Q4VNC0 1218 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 NAP1L5Q96NT1 182 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 MAK16Q9BXY0 300 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 HACD3Q9P035 362 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 TMEM63CQ9P1W3 806 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
EXOSC3-202ENST00000396521 OR5K3A6NET4 321 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 MTX2O75431 263 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 SCRG1O75711 98 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 PYGMP11217 842 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 AP1B1Q10567 949 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 INPP5JQ15735 1006 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 RPE65Q16518 533 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 MED25Q71SY5 747 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 OOSP2Q86WS3 158 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 RHOT1Q8IXI2 618 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 TMEM102Q8N9M5 508 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 MR1Q95460 341 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 AGAP3Q96P47 875 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 MAP3K3Q99759 626 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 SLAMF7Q9NQ25 335 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 HRASLS2Q9NWW9 162 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 ACSL5Q9ULC5 683 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 WDR37Q9Y2I8 494 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 HEY1Q9Y5J3 304 aa17.12■□□□□ 0.33
EXOSC3-202ENST00000396521 MATN2O00339 956 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 KLHL41O60662 606 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 SLC4A1P02730 911 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 PIRTP0C851 137 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 EBLN1P0CF75 366 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 RRADP55042 308 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 ITGA9Q13797 1035 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 PCSK7Q16549 785 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 NADK2Q4G0N4 442 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 KHDC1Q4VXA5 237 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 TEX44Q53QW1 395 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 METRNLQ641Q3 311 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 ARMC6Q6NXE6 501 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 PLD5Q8N7P1 536 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 CPT1BQ92523 772 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 NLNQ9BYT8 704 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 FANCEQ9HB96 536 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 TRIM10Q9UDY6 481 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 TMPRSS11EQ9UL52 423 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
EXOSC3-202ENST00000396521 CENPEQ02224 2701 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 NBPF19A0A087WUL8 3843 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 ARGFXA6NJG6 315 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 APOL1O14791 398 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 MAP3K7O43318 606 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 MSL3P1P0C860 447 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 TAS2R40P59535 323 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 XRCC4Q13426 336 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 ESPL1Q14674 2120 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 KCNAB1Q14722 419 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 LONRF2Q1L5Z9 754 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms