RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SMG5Q9UPR3 1016 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 BPTFQ12830 3046 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 TMEM120BA0PK00 339 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 SLC4A1P02730 911 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 F7P08709 466 aaPredicted RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 PMLP29590 882 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 CRHR1P34998 444 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 DRD3P35462 400 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 SPAM1P38567 509 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 P2RY2P41231 377 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 TTPAP49638 278 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 CDKN1CP49918 316 aaPredicted RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 NEK3P51956 506 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 DCDC1P59894 354 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 RPS14P62263 151 aaKnown RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 POU4F1Q01851 419 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 PRKCQQ04759 706 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 NFATC2Q13469 925 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 MLF2Q15773 248 aaPredicted RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 CST6Q15828 149 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 AARS2Q5JTZ9 985 aaKnown RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 ZNF852Q6ZMS4 543 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 HSD11B1LQ7Z5J1 315 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 SNX20Q7Z614 316 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 LDB1Q86U70 411 aaPredicted RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 C4orf33Q8N1A6 199 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 AADATQ8N5Z0 425 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 TXNDC5Q8NBS9 432 aaKnown RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 ZNF398Q8TD17 642 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 OMDQ99983 421 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 FBXO6Q9NRD1 293 aaPredicted RBP11.3□□□□□ -0.6
RTN1-203ENST00000395090 MKS1Q9NXB0 559 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 VWA7Q9Y334 891 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 SLC30A1Q9Y6M5 507 aa11.3□□□□□ -0.6
RTN1-203ENST00000395090 GLYATL1P3A0A0U1RQE8 302 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 FAM47DPA6NHR8 397 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 TPP1O14773 563 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 AP1G1O43747 822 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PRAMEF1O95521 474 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PRSS56P0CW18 603 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 CHRNB1P11230 501 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 NME1P15531 152 aaKnown RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 TYK2P29597 1187 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PTGER3P43115 390 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PSMD8P48556 350 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 CLCN5P51795 746 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 CCDC15Q0P6D6 951 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PDE1CQ14123 709 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 MAP7Q14244 749 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 STARD3Q14849 445 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 CHRNA6Q15825 494 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PIP5KL1Q5T9C9 394 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 RNF187Q5TA31 235 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 PRAMEF13Q5VWM6 474 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 FAM151BQ6UXP7 276 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 RFLNAQ6ZTI6 216 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 NRSN1Q8IZ57 195 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 C19orf47Q8N9M1 422 aaKnown RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 MDM1Q8TC05 714 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 LPGAT1Q92604 370 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 COQ10AQ96MF6 247 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 KLF6Q99612 283 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 DPH2Q9BQC3 489 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 MKRN2Q9H000 416 aaKnown RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 ASB8Q9H765 288 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 KCNK9Q9NPC2 374 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 SNX15Q9NRS6 342 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 PKD2L2Q9NZM6 624 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
RTN1-203ENST00000395090 SLC39A10Q9ULF5 831 aa11.29□□□□□ -0.6
RTN1-203ENST00000395090 FAM95CA0A1B0GW59 222 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 A6NNZ2 444 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 PLK4O00444 970 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 PFDN6O15212 129 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 MID1O15344 667 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 MPOP05164 745 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 HOXB2P14652 356 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 GM2AP17900 193 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 CD72P21854 359 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 CD9P21926 228 aa11.28□□□□□ -0.6
RTN1-203ENST00000395090 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
RTN1-203ENST00000395090 PPARGP37231 505 aaPredicted RBP11.28□□□□□ -0.6
RTN1-203ENST00000395090 MDH1P40925 334 aaKnown RBP11.28□□□□□ -0.6
RTN1-203ENST00000395090 ABCG1P45844 678 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms