RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 DARS2Q6PI48 645 aaKnown RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 CERS6Q6ZMG9 384 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 GLT6D1Q7Z4J2 308 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 PRUNE1Q86TP1 453 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SLC9B2Q86UD5 537 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 CDKL3Q8IVW4 592 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 FAM71DQ8N9W8 422 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 OR4K2Q8NGD2 314 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 OR10G6Q8NH81 332 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 ZNF398Q8TD17 642 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 HES6Q96HZ4 224 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SLC12A9Q9BXP2 914 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 TRIM4Q9C037 500 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 FAM96AQ9H5X1 160 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 ARNT2Q9HBZ2 717 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SMOXQ9NWM0 555 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 PIH1D1Q9NWS0 290 aaKnown RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SLC39A1Q9NY26 324 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 HACD3Q9P035 362 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 AKAP7Q9P0M2 348 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 KLHL3Q9UH77 587 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 PILRAQ9UKJ1 303 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 MN1Q10571 1320 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-205ENST00000394892 PIEZO2Q9H5I5 2752 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 SCN8AQ9UQD0 1980 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 COL6A6A6NMZ7 2263 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 OR5K4A6NMS3 321 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PDZK1P1A8MUH7 402 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 STX7O15400 261 aaKnown RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DUX1O43812 170 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PPFIA2O75334 1257 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PRAMEF1O95521 474 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DLGAP3O95886 979 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 ZNF28P17035 718 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TPH1P17752 444 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 ITGB6P18564 788 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 LPOP22079 712 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 F8A1P23610 371 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 CDC25BP30305 580 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 CSTF2P33240 577 aaKnown RBP eCLIP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 BIRC2Q13490 618 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 SIX1Q15475 284 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TAF1AQ15573 450 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM164Q5U3C3 297 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DUS1LQ6P1R4 473 aaKnown RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DET1Q7L5Y6 550 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 FAM129CQ86XR2 697 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TRAPPC5Q8IUR0 188 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PIANPQ8IYJ0 282 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 UNC5BQ8IZJ1 945 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TAB3Q8N5C8 712 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 GLIS1Q8NBF1 620 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 ATG4AQ8WYN0 398 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 EXTL1Q92935 676 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DNAJC1Q96KC8 554 aaKnown RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 C9orf72Q96LT7 481 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PPM1MQ96MI6 270 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 INSM2Q96T92 566 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DPYSL5Q9BPU6 564 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM121Q9BTD3 319 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 DDA1Q9BW61 102 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 STARD5Q9NSY2 213 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 SEMA5BQ9P283 1151 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 AMFRQ9UKV5 643 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 PSMD13Q9UNM6 376 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 CFAP20Q9Y6A4 193 aaKnown RBP8.68□□□□□ -1.02
ATG4A-205ENST00000394892 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
ATG4A-205ENST00000394892 MAST4O15021 2626 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 IGLV3-16A0A075B6K0 115 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 LOC101059948A0A1B0GTJ6 334 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 CYSRT1A8MQ03 144 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
ATG4A-205ENST00000394892 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-205ENST00000394892 ZW10O43264 779 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 SUV39H1O43463 412 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 RAD1O60671 282 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 ANXA9O76027 345 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
ATG4A-205ENST00000394892 UBXN7O94888 489 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TJP3O95049 919 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TIAF1O95411 115 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 VIPP01282 170 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 ANKRD34CP0C6C1 535 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 FAM87AP0C7U9 286 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 LIFP15018 202 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 IDSP22304 550 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 PSMA3P25788 255 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 CD82P27701 267 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 GRIA1P42261 906 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 NAP1L1P55209 391 aaKnown RBP8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TMPRSS15P98073 1019 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 OASLQ15646 514 aaKnown RBP8.67□□□□□ -1.02
ATG4A-205ENST00000394892 TBR1Q16650 682 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 BCL7AQ4VC05 210 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 LDLRAP1Q5SW96 308 aa8.67□□□□□ -1.02
ATG4A-205ENST00000394892 FNBP1LQ5T0N5 605 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms