RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CXorf40BQ96DE9 158 aa30.19■■■□□ 2.42
CMTM4-202ENST00000394106 CCDC97Q96F63 343 aaPredicted RBP30.19■■■□□ 2.42
CMTM4-202ENST00000394106 WASH6PQ9NQA3 447 aa30.19■■■□□ 2.42
CMTM4-202ENST00000394106 FAM8A1Q9UBU6 413 aa30.19■■■□□ 2.42
CMTM4-202ENST00000394106 WDR37Q9Y2I8 494 aa30.19■■■□□ 2.42
CMTM4-202ENST00000394106 AGAP14A8MT82 685 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 HGSO14964 777 aaPredicted RBP30.18■■■□□ 2.42
CMTM4-202ENST00000394106 THRAP10827 490 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 RALBP11234 206 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 HALP42357 657 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 CDKN1CP49918 316 aaPredicted RBP30.18■■■□□ 2.42
CMTM4-202ENST00000394106 DMPKQ09013 629 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 SEMA5AQ13591 1074 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 TRA2AQ13595 282 aaKnown RBP eCLIP30.18■■■□□ 2.42
CMTM4-202ENST00000394106 SNAP47Q5SQN1 464 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 DRICH1Q6PGQ1 229 aaPredicted RBP30.18■■■□□ 2.42
CMTM4-202ENST00000394106 TMEM26Q6ZUK4 368 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 TAS2R42Q7RTR8 314 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 STYXQ8WUJ0 223 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 COPS8Q99627 209 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 PSMD13Q9UNM6 376 aa30.18■■■□□ 2.42
CMTM4-202ENST00000394106 DRG1Q9Y295 367 aaKnown RBP30.18■■■□□ 2.42
CMTM4-202ENST00000394106 PRAMEF33A0A0G2JMD5 474 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 LILRA5A6NI73 299 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 KLK10O43240 276 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 SUN1O94901 812 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 RPL22P35268 128 aaKnown RBP30.17■■■□□ 2.42
CMTM4-202ENST00000394106 GRIA1P42261 906 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 TLE3Q04726 772 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 CLCA4Q14CN2 919 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 PDZD3Q86UT5 571 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 CDKN2AIPNLQ96HQ2 116 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 POT1Q9NUX5 634 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 PCDHGA7Q9Y5G6 932 aa30.17■■■□□ 2.42
CMTM4-202ENST00000394106 LAMA5O15230 3695 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 A8MU76 341 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 CFAP99D6REC4 459 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 APRTP07741 180 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 PRSS56P0CW18 603 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 CCL4P13236 92 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 KCNJ1P48048 391 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 GPR33Q49SQ1 333 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 WDR74Q6RFH5 385 aaPredicted RBP30.16■■■□□ 2.42
CMTM4-202ENST00000394106 USP7Q93009 1102 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 UCK1Q9HA47 277 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 JRKLQ9Y4A0 524 aa30.16■■■□□ 2.42
CMTM4-202ENST00000394106 MGAT4DA6NG13 374 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 MROH6A6NGR9 719 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 H7C0S8 307 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 CSTF2P33240 577 aaKnown RBP eCLIP30.15■■■□□ 2.42
CMTM4-202ENST00000394106 BCL7AQ4VC05 210 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 SERPINA9Q86WD7 417 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 AGBL5Q8NDL9 886 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 HEXDCQ8WVB3 486 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 DPH1Q9BZG8 443 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 KCNF1Q9H3M0 494 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 EPB41L1Q9H4G0 881 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 WDR70Q9NW82 654 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 ZDHHC3Q9NYG2 299 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 KLHL3Q9UH77 587 aa30.15■■■□□ 2.42
CMTM4-202ENST00000394106 CHD6Q8TD26 2715 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 PRAMEF10O60809 474 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 TYRP1P17643 537 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 ACRV1P26436 265 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 CACNG1Q06432 222 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 SKIDA1Q1XH10 827 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 BROXQ5VW32 411 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 REXO1L1PQ8IX06 675 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 OR2L2Q8NH16 312 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 SLC40A1Q9NP59 571 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 HOMER3Q9NSC5 361 aa30.14■■■□□ 2.42
CMTM4-202ENST00000394106 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.14■■■□□ 2.42
CMTM4-202ENST00000394106 NVLO15381 856 aaKnown RBP30.13■■■□□ 2.41
CMTM4-202ENST00000394106 ZSCAN12O43309 604 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 SGTAO43765 313 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 UBXN7O94888 489 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 ATP1B2P14415 290 aaPredicted RBP30.13■■■□□ 2.41
CMTM4-202ENST00000394106 AMD1P17707 334 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 ARSDP51689 593 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 BASP1P80723 227 aaKnown RBP30.13■■■□□ 2.41
CMTM4-202ENST00000394106 GPR18Q14330 331 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 RPE65Q16518 533 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 KCTD19Q17RG1 926 aaPredicted RBP30.13■■■□□ 2.41
CMTM4-202ENST00000394106 METRNLQ641Q3 311 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 PRELID2Q8N945 189 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 ANP32BQ92688 251 aaKnown RBP30.13■■■□□ 2.41
CMTM4-202ENST00000394106 CASS4Q9NQ75 786 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 OGFRQ9NZT2 677 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 PDP2Q9P2J9 529 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 ITPR1Q14643 2758 aa30.13■■■□□ 2.41
CMTM4-202ENST00000394106 TRBV5-4A0A0C4DH59 114 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 HEATR9A2RTY3 570 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 FGF3P11487 239 aaPredicted RBP30.12■■■□□ 2.41
CMTM4-202ENST00000394106 MSNP26038 577 aaKnown RBP30.12■■■□□ 2.41
CMTM4-202ENST00000394106 PRLHRP49683 370 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 FAM129CQ86XR2 697 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 RBM12BQ8IXT5 1001 aaKnown RBP30.12■■■□□ 2.41
CMTM4-202ENST00000394106 WWP1Q9H0M0 922 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 FOXJ2Q9P0K8 574 aa30.12■■■□□ 2.41
CMTM4-202ENST00000394106 CFAP20Q9Y6A4 193 aaKnown RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms