RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CHSY3Q70JA7 882 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 SFTPA1Q8IWL2 248 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 RAVER1Q8IY67 606 aaKnown RBP21.87■■□□□ 1.09
HMGA2-203ENST00000393578 PELI3Q8N2H9 469 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 DCUN1D1Q96GG9 259 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 CATSPER2Q96P56 530 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 LENG8Q96PV6 779 aaPredicted RBP21.87■■□□□ 1.09
HMGA2-203ENST00000393578 SEMA4BQ9NPR2 832 aaPredicted RBP21.87■■□□□ 1.09
HMGA2-203ENST00000393578 OARD1Q9Y530 152 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 TNPO3Q9Y5L0 923 aaKnown RBP21.87■■□□□ 1.09
HMGA2-203ENST00000393578 DNAJC15Q9Y5T4 150 aa21.87■■□□□ 1.09
HMGA2-203ENST00000393578 PLXNA2O75051 1894 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 DOCK8Q8NF50 2099 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 PIKFYVEQ9Y2I7 2098 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 PSMD11O00231 422 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 EIF3FO00303 357 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-203ENST00000393578 S100BP04271 92 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-203ENST00000393578 THRAP10827 490 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 AKT1P31749 480 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 ADAM15Q13444 863 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 FBXO48Q5FWF7 155 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 NAIF1Q69YI7 327 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-203ENST00000393578 PDPRQ8NCN5 879 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 PIP4K2CQ8TBX8 421 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 ELSPBP1Q96BH3 223 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 C19orf60Q96EN9 201 aa21.86■■□□□ 1.09
HMGA2-203ENST00000393578 RIOK2Q9BVS4 552 aaKnown RBP21.86■■□□□ 1.09
HMGA2-203ENST00000393578 TSR3Q9UJK0 312 aaKnown RBP21.86■■□□□ 1.09
HMGA2-203ENST00000393578 LOC100653049A0A140TA62 436 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 CFAP99D6REC4 459 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 H0Y858 1186 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 E2F3O00716 465 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 FFAR2O15552 330 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 KRT34O76011 436 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 WFS1O76024 890 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 PIK3R1P27986 724 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 EIF2DP41214 584 aaKnown RBP21.85■■□□□ 1.09
HMGA2-203ENST00000393578 GRIN2CQ14957 1233 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 ZNF284Q2VY69 593 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 CYHR1Q6ZMK1 362 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 NRSN1Q8IZ57 195 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 ABHD8Q96I13 439 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 FAM129BQ96TA1 746 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 HGH1Q9BTY7 390 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 ZBTB26Q9HCK0 441 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 G3BP2Q9UN86 482 aaKnown RBP21.85■■□□□ 1.09
HMGA2-203ENST00000393578 ENO3P13929 434 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-203ENST00000393578 EZRP15311 586 aaKnown RBP21.85■■□□□ 1.09
HMGA2-203ENST00000393578 CCR7P32248 378 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 PCBP2Q15366 365 aaKnown RBP eCLIP21.85■■□□□ 1.094e-8■■■■■ 30.7
HMGA2-203ENST00000393578 WASHC2DQ5SRD0 308 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 DDHD1Q8NEL9 900 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 OR56A4Q8NGH8 313 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 KXD1Q9BQD3 176 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 COPG1Q9Y678 874 aaKnown RBP21.85■■□□□ 1.09
HMGA2-203ENST00000393578 REV3LO60673 3130 aa21.85■■□□□ 1.09
HMGA2-203ENST00000393578 AP2A2O94973 939 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 ESRRBO95718 433 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 LAMP2P13473 410 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 AOAHP28039 575 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 MYO9BQ13459 2157 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 PREPLQ4J6C6 727 aaPredicted RBP21.84■■□□□ 1.09
HMGA2-203ENST00000393578 FBXL19Q6PCT2 694 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 RP9Q8TA86 221 aaKnown RBP21.84■■□□□ 1.09
HMGA2-203ENST00000393578 TWIST2Q8WVJ9 160 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 SUSD6Q92537 303 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 PPP1R16AQ96I34 528 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 VPS35Q96QK1 796 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 S1PR5Q9H228 398 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 CLEC1BQ9P126 229 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 EIF2B4Q9UI10 523 aaKnown RBP21.84■■□□□ 1.09
HMGA2-203ENST00000393578 ADAMTS6Q9UKP5 1117 aa21.84■■□□□ 1.09
HMGA2-203ENST00000393578 METAP1P53582 386 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 FOXA1P55317 472 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 ELP6Q0PNE2 266 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 HERC3Q15034 1050 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 ACOX1Q15067 660 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 LARP4Q71RC2 724 aaKnown RBP eCLIP21.83■■□□□ 1.09
HMGA2-203ENST00000393578 BTN2A2Q8WVV5 523 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 ARRDC3Q96B67 414 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 RTKNQ9BST9 563 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 RDH14Q9HBH5 336 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 THAP10Q9P2Z0 257 aaPredicted RBP21.83■■□□□ 1.09
HMGA2-203ENST00000393578 PTBP2Q9UKA9 531 aaKnown RBP21.83■■□□□ 1.09
HMGA2-203ENST00000393578 ITM2BQ9Y287 266 aa21.83■■□□□ 1.09
HMGA2-203ENST00000393578 TCF20Q9UGU0 1960 aaKnown RBP21.83■■□□□ 1.09
HMGA2-203ENST00000393578 MEI4A8MW99 385 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 FADS2P1A8MWK0 482 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 WNT9AO14904 365 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 GIPC1O14908 333 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 KPNA5O15131 536 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 UBDO15205 165 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 SPINT1O43278 529 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 TM7SF2O76062 418 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 KAT7O95251 611 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 VCLP18206 1134 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 RAP1GDS1P52306 607 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 GBX1Q14549 363 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 PARM1Q6UWI2 310 aa21.83■■□□□ 1.08
HMGA2-203ENST00000393578 DET1Q7L5Y6 550 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms