RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 EIF3FO00303 357 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 QSOX1O00391 747 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 STX16O14662 325 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SUPT7LO94864 414 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 IDH3AP50213 366 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 TAS2R38P59533 333 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 ZBTB16Q05516 673 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 GRSF1Q12849 480 aaKnown RBP eCLIP17.23■□□□□ 0.35
MBD4-202ENST00000393278 BNIP1Q12981 228 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 GBX1Q14549 363 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 STARD3Q14849 445 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SPDYAQ5MJ70 313 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SBSNQ6UWP8 590 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 CYHR1Q6ZMK1 362 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 CLNKQ7Z7G1 428 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 ALYREFQ86V81 257 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 CACUL1Q86Y37 369 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 PHYKPLQ8IUZ5 450 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 PELI3Q8N2H9 469 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 COG4Q9H9E3 785 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 FBRSQ9HAH7 460 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 NUDT4Q9NZJ9 180 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 TSR3Q9UJK0 312 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 CNOT6Q9ULM6 557 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 HDAC3O15379 428 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 TSPAN6O43657 245 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 ADAM23O75077 832 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SIX3O95343 332 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 KLF8O95600 359 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 ENO3P13929 434 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 ALDH18A1P54886 795 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 TUBB3Q13509 450 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SKIV2LQ15477 1246 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 TGFBIQ15582 683 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 ZNF648Q5T619 568 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 SEL1L3Q68CR1 1132 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 TRMT11Q7Z4G4 463 aaKnown RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 HDDC3Q8N4P3 179 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 RILPQ96NA2 401 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 C1QTNF3Q9BXJ4 246 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
MBD4-202ENST00000393278 VTI1BQ9UEU0 232 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 SERGEFQ9UGK8 458 aa17.23■□□□□ 0.35
MBD4-202ENST00000393278 A0A1W2PP55 124 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 A0A1W2PQF6 199 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 INPP4BO15327 924 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 GRID2O43424 1007 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 FTH1P02794 183 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 ASGR2P07307 311 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 RPS17P08708 135 aaKnown RBP17.22■□□□□ 0.35
MBD4-202ENST00000393278 HOXB2P14652 356 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 GLULP15104 373 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 GPR1P46091 355 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 SH2D4BQ5SQS7 431 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 PLEKHS1Q5SXH7 462 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 IER5LQ5T953 404 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 VWA5B1Q5TIE3 1220 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 EPGNQ6UW88 154 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 FRA10AC1Q70Z53 315 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 CUZD1Q86UP6 607 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 RASGEF1AQ8N9B8 481 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 MAPK15Q8TD08 544 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 FAM126AQ9BYI3 521 aaPredicted RBP17.22■□□□□ 0.35
MBD4-202ENST00000393278 NMUR2Q9GZQ4 415 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 MKRN2Q9H000 416 aaKnown RBP17.22■□□□□ 0.35
MBD4-202ENST00000393278 CD274Q9NZQ7 290 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 APOBEC2Q9Y235 224 aaKnown RBP17.22■□□□□ 0.35
MBD4-202ENST00000393278 OARD1Q9Y530 152 aa17.22■□□□□ 0.35
MBD4-202ENST00000393278 LRRC14BA6NHZ5 514 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 NCF1BA6NI72 391 aaPredicted RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 NCF1CA8MVU1 366 aaPredicted RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 K7ESM1 405 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 FCHO1O14526 889 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 KPNA5O15131 536 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 SNX2O60749 519 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 NCF1P14598 390 aaPredicted RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 EEF1DP29692 281 aaKnown RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 SCTRP47872 440 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 CORO7P57737 925 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 NAA20P61599 178 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 TMEM115Q12893 351 aaPredicted RBP17.21■□□□□ 0.35
MBD4-202ENST00000393278 KIRREL3Q8IZU9 778 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 STON2Q8WXE9 905 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 FAM131CQ96AQ9 280 aa17.21■□□□□ 0.35
MBD4-202ENST00000393278 F5P12259 2224 aa17.2■□□□□ 0.34
MBD4-202ENST00000393278 OR2AG2A6NM03 316 aa17.2■□□□□ 0.34
MBD4-202ENST00000393278 UBFD1O14562 309 aaKnown RBP17.2■□□□□ 0.34
MBD4-202ENST00000393278 RAD51BO15315 384 aa17.2■□□□□ 0.34
MBD4-202ENST00000393278 NUAK1O60285 661 aa17.2■□□□□ 0.34
MBD4-202ENST00000393278 CCDC22O60826 627 aa17.2■□□□□ 0.34
MBD4-202ENST00000393278 DIAPH2O60879 1101 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms