RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 LRRC14BA6NHZ5 514 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 E9PBE3 544 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 NEMP1O14524 444 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 NPC1O15118 1278 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 KLHL41O60662 606 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CDK14O94921 469 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ENO3P13929 434 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 EPHA3P29320 983 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 AKT1P31749 480 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CDH13P55290 713 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 SH3BP2P78314 561 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CREB5Q02930 508 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CLCQ05315 142 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 LCP2Q13094 533 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 GBX1Q14549 363 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 LDLRAP1Q5SW96 308 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 EP400NLQ6ZTU2 488 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 FRA10AC1Q70Z53 315 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 PDPRQ8NCN5 879 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ACOX2Q99424 681 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 HDAC8Q9BY41 377 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CACNA2D2Q9NY47 1150 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CD274Q9NZQ7 290 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 GOLGA8QA0A0J9YX86 632 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 GOLGA8OA6NCC3 632 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 NCF1BA6NI72 391 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 NCF1CA8MVU1 366 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 ANHXE9PGG2 379 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 GOLGA8NF8WBI6 632 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 QSOX1O00391 747 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 SDHDO14521 159 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 RAD51BO15315 384 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 KRT16P08779 473 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 NCF1P14598 390 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 AOAHP28039 575 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 CCR7P32248 378 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 BTKQ06187 659 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 HTR4Q13639 388 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 TMEM52BQ4KMG9 183 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 ERN2Q76MJ5 926 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZNF765Q7L2R6 523 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 CLYBLQ8N0X4 340 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 RAB7BQ96AH8 199 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 AP2M1Q96CW1 435 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 NSUN5Q96P11 429 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 WRAP53Q9BUR4 548 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 PCTPQ9UKL6 214 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 STON1Q9Y6Q2 735 aa11.27□□□□□ -0.6
SMARCAL1-203ENST00000392128 KPNA5O15131 536 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 SLC22A2O15244 555 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 MLYCDO95822 493 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 TSPAN8P19075 237 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 MSH3P20585 1137 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 TNFRSF4P43489 277 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 FAM46CQ5VWP2 391 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 CPSF7Q8N684 471 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 ACTRT2Q8TDY3 377 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 TRPC4APQ8TEL6 797 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 AGAP11Q8TF27 550 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 GLYATL1Q969I3 302 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 PPP1R36Q96LQ0 422 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 MYCBPQ99417 103 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 RDH14Q9HBH5 336 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 FBRSL1Q9HCM7 1045 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 TNPO3Q9Y5L0 923 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-203ENST00000392128 ANTXRLA6NF34 631 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 E2F3O00716 465 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 FFAR2O15552 330 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 SGTAO43765 313 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 S100BP04271 92 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 COL4A2P08572 1712 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 POU3F3P20264 500 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 PRDX6P30041 224 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 PSMD8P48556 350 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 AGTR2P50052 363 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 ELF3P78545 371 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 PLEKHS1Q5SXH7 462 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 KANK2Q63ZY3 851 aa11.26□□□□□ -0.61
SMARCAL1-203ENST00000392128 DET1Q7L5Y6 550 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms