RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 BIRC2Q13490 618 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 LONRF2Q1L5Z9 754 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 COL28A1Q2UY09 1125 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 MAP9Q49MG5 647 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 TMEM26Q6ZUK4 368 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 ARHGAP22Q7Z5H3 698 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 PIANPQ8IYJ0 282 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 TAB3Q8N5C8 712 aaPredicted RBP11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR52K1Q8NGK4 314 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR2L2Q8NH16 312 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR10G6Q8NH81 332 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 HEXDCQ8WVB3 486 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 SGF29Q96ES7 293 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC74BQ96LY2 380 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 TTC25Q96NG3 672 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 TBC1D10AQ9BXI6 508 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OSGEPL1Q9H4B0 414 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRORYQ9H606 182 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC40A1Q9NP59 571 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 RAB6BQ9NRW1 208 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 PIH1D1Q9NWS0 290 aaKnown RBP11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 OGFRQ9NZT2 677 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 LOXL2Q9Y4K0 774 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC30A1Q9Y6M5 507 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
IGHV4-28-201ENST00000390612 FASNP49327 2511 aaKnown RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 MN1Q10571 1320 aaPredicted RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRAMEF33A0A0G2JMD5 474 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 C17orf113A0A1B0GUU1 675 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR52A4PA6NMU1 304 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 DUX1O43812 170 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 C9P02748 559 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 FGF3P11487 239 aaPredicted RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 ITIH1P19827 911 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 MSH3P20585 1137 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 ITGALP20701 1170 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 ADRA1DP25100 572 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 ACRV1P26436 265 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 RPL10P27635 214 aaKnown RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 SLC5A2P31639 672 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 MC4RP32245 332 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 KCNJ1P48048 391 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRLHRP49683 370 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 TMPRSS15P98073 1019 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 NFE2L1Q14494 772 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 CYP1B1Q16678 543 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 SKIDA1Q1XH10 827 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 FNBP1LQ5T0N5 605 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 RBM12BQ8IXT5 1001 aaKnown RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 BEND7Q8N7W2 519 aaPredicted RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 BMPERQ8N8U9 685 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 OR13J1Q8NGT2 312 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 CRELD1Q96HD1 420 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 SGSM3Q96HU1 749 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 PBKQ96KB5 322 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 COPS8Q99627 209 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 CMKLR1Q99788 373 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 DPH1Q9BZG8 443 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 FAM96AQ9H5X1 160 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 STN1Q9H668 368 aaKnown RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 EIF2B3Q9NR50 452 aaKnown RBP11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 POT1Q9NUX5 634 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZDHHC3Q9NYG2 299 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 PCM1Q15154 2024 aa11.17□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC162PA2VCL2 907 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 PDZK1P1A8MUH7 402 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 C9orf172C9J069 976 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 VIPP01282 170 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 PRSS56P0CW18 603 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCL4P13236 92 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 ATP1B2P14415 290 aaPredicted RBP11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 AKT1P31749 480 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 FOXN2P32314 431 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 MAGEA6P43360 314 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 ABCG1P45844 678 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 DRG2P55039 364 aaKnown RBP11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 CACNG1Q06432 222 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 RPE65Q16518 533 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 DBN1Q16643 649 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 TSTD2Q5T7W7 516 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 CAPRIN2Q6IMN6 1127 aaKnown RBP11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 FOXR1Q6PIV2 292 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 SERPINA9Q86WD7 417 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 CCDC89Q8N998 374 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 RCBTB1Q8NDN9 531 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 NAT14Q8WUY8 206 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 PEX13Q92968 403 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 MS4A14Q96JA4 679 aa11.16□□□□□ -0.62
IGHV4-28-201ENST00000390612 ZNF778Q96MU6 729 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms