RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RRP9O43818 475 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OPA1O60313 960 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MGEA5O60502 916 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SNAP91O60641 907 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PRDM1O75626 825 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PIAS2O75928 621 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ACTL6BO94805 426 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 AIFM1O95831 613 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 F2P00734 622 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 IGLV2-8P01709 118 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 IGLV6-57P01721 117 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 AHSGP02765 367 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MT-ND1P03886 318 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ASLP04424 464 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP21A2P08686 494 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ALDOCP09972 364 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SP9P0CG40 484 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CD58P19256 250 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ITGAXP20702 1163 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP2A7P20853 494 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DRD1P21728 446 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RRM1P23921 792 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NR2F2P24468 414 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PRKCHP24723 683 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DNASE1P24855 282 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LMO2P25791 158 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PRDX5P30044 214 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HLA-FP30511 346 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ELF1P32519 619 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HTR7P34969 479 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TGFBR1P36897 503 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ID1P41134 155 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NSFP46459 744 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TFPI2P48307 235 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 EFNA3P52797 238 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CTSCP53634 463 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 VCPP55072 806 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PRMT2P55345 433 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RAG2P55895 527 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 UCP3P55916 312 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ISL1P61371 349 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ERVK-16P61578 105 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ACTA2P62736 377 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ACTC1P68032 377 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 IRX3P78415 501 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SHC2P98077 582 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PDE1BQ01064 536 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SRSF2Q01130 221 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FLI1Q01543 452 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NAAAQ02083 359 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RHAGQ02094 409 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 EMX1Q04741 257 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MBTD1Q05BQ5 628 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 EXOSC9Q06265 439 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RBPJQ06330 500 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MTAPQ13126 283 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC39A6Q13433 755 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SNAPC2Q13487 334 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ACVR2BQ13705 512 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 BLMHQ13867 455 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DPYSQ14117 519 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LPIN1Q14693 890 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 P2RY6Q15077 328 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RPS6KA1Q15418 735 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TAF13Q15543 124 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LTB4RQ15722 352 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SGCBQ16585 318 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF630Q2M218 657 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 KRT24Q2M2I5 525 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LETM2Q2VYF4 491 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CFAP100Q494V2 611 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC14Q49A88 953 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 C5orf22Q49AR2 442 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CDONQ4KMG0 1287 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC22A6Q4U2R8 563 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FNDC3BQ53EP0 1204 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF394Q53GI3 561 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LINC00483Q53H64 154 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TOR2AQ5JU69 321 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF506Q5JVG8 444 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 N4BP2L1Q5TBK1 243 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 EMC10Q5UCC4 262 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM171A1Q5VUB5 890 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 GARNL3Q5VVW2 1013 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FRG2Q64ET8 278 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ACSM2BQ68CK6 577 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CDCA2Q69YH5 1023 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TXNRD3NBQ6F5E7 133 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ADNP2Q6IQ32 1131 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CGB2Q6NT52 195 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NOTUMQ6P988 496 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF880Q6PDB4 577 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DCLRE1AQ6PJP8 1040 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LCLAT1Q6UWP7 414 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CLEC9AQ6UXN8 241 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF704Q6ZNC4 412 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 IL17RELQ6ZVW7 336 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PLEKHM3Q6ZWE6 761 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PIWIL4Q7Z3Z4 852 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 KCNK18Q7Z418 384 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms