RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GOLGA8CPA6NN73 597 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 BTN3A1O00481 513 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PFDN6O15212 129 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PRAMEF1O95521 474 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 EPCAMP16422 314 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 MRPS22P82650 360 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 CACNG1Q06432 222 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 CD300CQ08708 224 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 ADRM1Q16186 407 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PPP1R3AQ16821 1122 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 AARS2Q5JTZ9 985 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 OR2AP1Q8NGE2 309 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 MYLIPQ8WY64 445 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 MAELQ96JY0 434 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 LMLNQ96KR4 655 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 LINC00597Q9H2U6 94 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 ATP13A3Q9H7F0 1226 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 COPS7BQ9H9Q2 264 aaPredicted RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PLGRKTQ9HBL7 147 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 TRMT6Q9UJA5 497 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 RAB26Q9ULW5 256 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 TRAF6Q9Y4K3 522 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 HCFC2Q9Y5Z7 792 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 E5RI56 91 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 GAPDHSO14556 408 aaPredicted RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 KERAO60938 352 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 ECI2O75521 394 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 SYN1P17600 705 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PTPN2P17706 415 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 SH3BP2P78314 561 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 PDCD4Q53EL6 469 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 TSPAN33Q86UF1 283 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 FBXW8Q8N3Y1 598 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 STAG3L4Q8TBR4 150 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 CD200R1Q8TD46 325 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 EEF1AKMT1Q8WVE0 214 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 CCT7Q99832 543 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 BBS2Q9BXC9 721 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
CLCN4-201ENST00000380829 COPG1Q9Y678 874 aaKnown RBP14.1□□□□□ -0.15
CLCN4-201ENST00000380829 FUOMA2VDF0 154 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 AIM2O14862 343 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 ARHGEF15O94989 841 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 TSPAN12O95859 305 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 EN2P19622 333 aaPredicted RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 PRDX6P30041 224 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 PTGER3P43115 390 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 GALNT1Q10472 559 aaPredicted RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 MAP7D1Q3KQU3 841 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 RARS2Q5T160 578 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 CCDC80Q76M96 950 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 RAB44Q7Z6P3 723 aaPredicted RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 LINGO1Q96FE5 620 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 BOCQ9BWV1 1114 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 OSBPL6Q9BZF3 934 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 MEAF6Q9HAF1 191 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 TDP1Q9NUW8 608 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 PSMD13Q9UNM6 376 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 GBF1Q92538 1859 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 HELZP42694 1942 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 PER2O15055 1255 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 LSM1O15116 133 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 CBFA2T3O75081 653 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 SOCS5O75159 536 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 MYOGP15173 224 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 SERPINA4P29622 427 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 MAPK8P45983 427 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 CDK9P50750 372 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 EPHA5P54756 1037 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 C22orf39Q6P5X5 142 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 SERPINA9Q86WD7 417 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 CROCCP3Q8IVE0 287 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 FBXO39Q8N4B4 442 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 NKAPQ8N5F7 415 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 CPSF7Q8N684 471 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 TRIML2Q8N7C3 387 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 KCNJ9Q92806 393 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 FUBP1Q96AE4 644 aaKnown RBP14.09□□□□□ -0.15
CLCN4-201ENST00000380829 VOPP1Q96AW1 172 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 FAR2Q96K12 515 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 LRGUKQ96M69 825 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 ZSWIM3Q96MP5 696 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 TRMOQ9BU70 441 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 ASB8Q9H765 288 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 MID1IP1Q9NPA3 183 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 SLCO3A1Q9UIG8 710 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 COQ6Q9Y2Z9 468 aa14.09□□□□□ -0.15
CLCN4-201ENST00000380829 C5orf42Q9H799 3197 aa14.08□□□□□ -0.16
CLCN4-201ENST00000380829 LINC01553A4QN01 128 aa14.08□□□□□ -0.16
CLCN4-201ENST00000380829 RGSL1A5PLK6 1076 aa14.08□□□□□ -0.16
CLCN4-201ENST00000380829 NPIPB15A6NHN6 443 aaPredicted RBP14.08□□□□□ -0.16
CLCN4-201ENST00000380829 TRIM24O15164 1050 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms