RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZNF7P17097 686 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-202ENST00000380747 ADRA1DP25100 572 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 CASQ1P31415 396 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 FNTAP49354 379 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 NFATC2Q13469 925 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 LAMB3Q13751 1172 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 HLTFQ14527 1009 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGN1-202ENST00000380747 PPP1R7Q15435 360 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 TSTD2Q5T7W7 516 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 TMEM220Q6QAJ8 160 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 MICALCLQ6ZW33 695 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 TAS2R42Q7RTR8 314 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 SNX20Q7Z614 316 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 TMPRSS12Q86WS5 348 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 KLHL7Q8IXQ5 586 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 RASGEF1AQ8N9B8 481 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 DDHD1Q8NEL9 900 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 PATE1Q8WXA2 126 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 ULK4Q96C45 1275 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 DCUN1D1Q96GG9 259 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 CDKN2AIPNLQ96HQ2 116 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC3Q9BQI4 270 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 DDX47Q9H0S4 455 aaKnown RBP9.1□□□□□ -0.95
HMGN1-202ENST00000380747 PRORYQ9H606 182 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 KCND1Q9NSA2 647 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 SMOXQ9NWM0 555 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 LRIT1Q9P2V4 623 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 SLC23A2Q9UGH3 650 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 DNAJC16Q9Y2G8 782 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 RNF215Q9Y6U7 377 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 TCRBV7S3A2A0A539 114 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC162PA2VCL2 907 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 MROH6A6NGR9 719 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 OR2AG2A6NM03 316 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 RHPN2P1A8MT19 583 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PDZK1P1A8MUH7 402 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 J3QL48 77 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 AP3B1O00203 1094 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 EML2O95834 649 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 RPLP0P05388 317 aaKnown RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PRSS56P0CW18 603 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 GLB1P16278 677 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 VCLP18206 1134 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 TPSB2P20231 275 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 MGAT1P26572 445 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PBLDP30039 288 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 NPY2RP49146 381 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PPM1FP49593 454 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CDKN1CP49918 316 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 ARSDP51689 593 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CTSCP53634 463 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CRADDP78560 199 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 SARNPP82979 210 aaKnown RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CACNG1Q06432 222 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.959e-9■■■□□ 17.5
HMGN1-202ENST00000380747 TPSAB1Q15661 275 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 SEPT7Q16181 437 aaKnown RBP9.09□□□□□ -0.95
HMGN1-202ENST00000380747 GPR33Q49SQ1 333 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 PCID2Q5JVF3 399 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CREG2Q8IUH2 290 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CCNJLQ8IV13 435 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 ZNF547Q8IVP9 402 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 NAGSQ8N159 534 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 NXPE1Q8N323 547 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 ARL14Q8N4G2 192 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 OR6C4Q8NGE1 309 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 NAT14Q8WUY8 206 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 NXPE2Q96DL1 559 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CRELD1Q96HD1 420 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 RANBP9Q96S59 729 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 COPS8Q99627 209 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 C19orf43Q9BQ61 176 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 TIMM29Q9BSF4 260 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 BFARQ9NZS9 450 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 TBC1D29Q9UFV1 150 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 SLC2A6Q9UGQ3 507 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 ASIC3Q9UHC3 531 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 CLCA2Q9UQC9 943 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 TCAF1Q9Y4C2 921 aa9.09□□□□□ -0.95
HMGN1-202ENST00000380747 COL6A6A6NMZ7 2263 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 OR51F1A6NGY5 319 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 GOLGA8MH3BSY2 632 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 H7C0S8 307 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CASC3O15234 703 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 FANCGO15287 622 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 NUDT21O43809 227 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 POP7O75817 140 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 GOT2P00505 430 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 RALBP11234 206 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 SLC2A4P14672 509 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 EIF2S3P41091 472 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
HMGN1-202ENST00000380747 PRAMEP78395 509 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CCL7P80098 99 aa9.08□□□□□ -0.96
HMGN1-202ENST00000380747 CDK16Q00536 496 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms