RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NCF1P14598 390 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 AGTR2P50052 363 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 RPS6KA2Q15349 733 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 C8orf82Q6P1X6 216 aaPredicted RBP22.8■■□□□ 1.24
VPS16-201ENST00000380443 BRAT1Q6PJG6 821 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 ZDHHC7Q9NXF8 308 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 KCTD5Q9NXV2 234 aa22.8■■□□□ 1.24
VPS16-201ENST00000380443 FFAR2O15552 330 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 HGFP14210 728 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 ZNF30P17039 623 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 XRCC1P18887 633 aaPredicted RBP22.79■■□□□ 1.24
VPS16-201ENST00000380443 RECQLP46063 649 aaPredicted RBP22.79■■□□□ 1.24
VPS16-201ENST00000380443 SAMD4BQ5PRF9 694 aaKnown RBP22.79■■□□□ 1.24
VPS16-201ENST00000380443 LRRC66Q68CR7 880 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 DPY19L3Q6ZPD9 716 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 FUNDC1Q8IVP5 155 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 AHI1Q8N157 1196 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 EFCAB3Q8N7B9 438 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 KCNA7Q96RP8 456 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 FBRSL1Q9HCM7 1045 aaKnown RBP22.79■■□□□ 1.24
VPS16-201ENST00000380443 RAD18Q9NS91 495 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 ADA2Q9NZK5 511 aa22.79■■□□□ 1.24
VPS16-201ENST00000380443 PTBP2Q9UKA9 531 aaKnown RBP22.79■■□□□ 1.24
VPS16-201ENST00000380443 LINC00032P0C843 101 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 CHRM1P11229 460 aaPredicted RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 TYRP14679 529 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UGT1A6P19224 532 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UGT1A1P22309 533 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UGT1A4P22310 534 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UGT1A3P35503 534 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UGT1A5P35504 534 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 DPP6P42658 865 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TRIM25Q14258 630 aaKnown RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 ASTLQ6HA08 431 aaPredicted RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 SULT1C3Q6IMI6 304 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 PAOXQ6QHF9 649 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 GDPD4Q6W3E5 623 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 GPR26Q8NDV2 337 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 COPS8Q99627 209 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 ECSITQ9BQ95 431 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 C17orf80Q9BSJ5 609 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 BOCQ9BWV1 1114 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 KLHL4Q9C0H6 718 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 EIF2B4Q9UI10 523 aaKnown RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 IGLV3-16A0A075B6K0 115 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 C5orf67F2Z3F1 127 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 H3BNX3 289 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 ACOT8O14734 319 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TRIM24O15164 1050 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 GPR39O43194 453 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 OTCP00480 354 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 RB1P06400 928 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 CYP2A6P11509 494 aaPredicted RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 NNMTP40261 264 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 MRPS35P82673 323 aaKnown RBP22.78■■□□□ 1.24
VPS16-201ENST00000380443 FOXM1Q08050 763 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 BLMHQ13867 455 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TRIM68Q6AZZ1 485 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 RNF165Q6ZSG1 346 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TSPAN33Q86UF1 283 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 PLCD3Q8N3E9 789 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 UBTD2Q8WUN7 234 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 ZDHHC6Q9H6R6 413 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 BRD9Q9H8M2 597 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 GID8Q9NWU2 228 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 PKD2L2Q9NZM6 624 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TMEM181Q9P2C4 612 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 SLC8A2Q9UPR5 921 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 GPR45Q9Y5Y3 372 aa22.78■■□□□ 1.24
VPS16-201ENST00000380443 TRIM16O95361 564 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 VCLP18206 1134 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 POLR2EP19388 210 aaKnown RBP22.77■■□□□ 1.24
VPS16-201ENST00000380443 MSH3P20585 1137 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 PTSQ03393 145 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 KLC1Q07866 573 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 GRB7Q14451 532 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 PDCD4Q53EL6 469 aaKnown RBP22.77■■□□□ 1.24
VPS16-201ENST00000380443 PRSS36Q5K4E3 855 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 PDE12Q6L8Q7 609 aaKnown RBP22.77■■□□□ 1.24
VPS16-201ENST00000380443 ADIPOR2Q86V24 386 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 HCAR2Q8TDS4 363 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 MICAL1Q8TDZ2 1067 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 PBXIP1Q96AQ6 731 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 AIG1Q9NVV5 245 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 ZNF225Q9UK10 706 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 PRSS21Q9Y6M0 314 aa22.77■■□□□ 1.24
VPS16-201ENST00000380443 LAMA2P24043 3122 aaKnown RBP22.77■■□□□ 1.24
VPS16-201ENST00000380443 DYTNA2CJ06 578 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 RFPL2O75678 378 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 OR56A5P0C7T3 313 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 ERVK-8P63133 956 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 PQLC1Q8N2U9 271 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 HIPK4Q8NE63 616 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 CATSPER1Q8NEC5 780 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 LRIG1Q96JA1 1093 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 NR1H4Q96RI1 486 aaPredicted RBP22.76■■□□□ 1.23
VPS16-201ENST00000380443 BRINP2Q9C0B6 783 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 ZIM2Q9NZV7 527 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 CD300AQ9UGN4 299 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 BTRCQ9Y297 605 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms