RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ATP6AP2A0A1C7CYW4 349 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 RGSL1A5PLK6 1076 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 TBC1D3BA6NDS4 549 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 E2F3O00716 465 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 ATP6AP2O75787 350 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 OR56A5P0C7T3 313 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 THRAP10827 490 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 GM2AP17900 193 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 MMP12P39900 470 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 OPRD1P41143 372 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 TTLL9Q3SXZ7 439 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 ERAP2Q6P179 960 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 LIPIQ6XZB0 460 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 DET1Q7L5Y6 550 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 C19orf60Q96EN9 201 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 MYADMQ96S97 322 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 RIOK2Q9BVS4 552 aaKnown RBP19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 NSUN3Q9H649 340 aaKnown RBP19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 SMOXQ9NWM0 555 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 KCTD5Q9NXV2 234 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 EIF2B4Q9UI10 523 aaKnown RBP19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 ITM2BQ9Y287 266 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 DENND4AQ7Z401 1863 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 ATG2BQ96BY7 2078 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 RAD51BO15315 384 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 FFAR2O15552 330 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 MTX2O75431 263 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 WFS1O76024 890 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 ATP1B2P14415 290 aaPredicted RBP19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 PRDX3P30048 256 aaKnown RBP19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 AKT1P31749 480 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 CCR7P32248 378 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 C18orf21Q32NC0 220 aaPredicted RBP19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 WASHC2DQ5SRD0 308 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 HENMT1Q5T8I9 393 aaKnown RBP19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 LARP4Q71RC2 724 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 TECPR1Q7Z6L1 1165 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 SCUBE1Q8IWY4 988 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 CPA6Q8N4T0 437 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 TWIST2Q8WVJ9 160 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 OR8D1Q8WZ84 308 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 CLPTM1LQ96KA5 538 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 TMEM245Q9H330 911 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 ZNF225Q9UK10 706 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 PPM1HQ9ULR3 514 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 OARD1Q9Y530 152 aa19.55■□□□□ 0.72
PDLIM5-205ENST00000380180 ANTXRLA6NF34 631 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 UBDO15205 165 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 TM7SF2O76062 418 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 MLYCDO95822 493 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 GUCA1CO95843 209 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ELFN1P0C7U0 828 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 GJA4P35212 333 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 RAP1GDS1P52306 607 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 CUL3Q13618 768 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 CRY1Q16526 586 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 SNX32Q86XE0 403 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 YAF2Q8IY57 180 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 TRAM1L1Q8N609 369 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 TMIEQ8NEW7 156 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 RP9Q8TA86 221 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PIP4K2CQ8TBX8 421 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 DTX3LQ8TDB6 740 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 DLG3Q92796 817 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 FAM161BQ96MY7 647 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 RTKNQ9BST9 563 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 RAD18Q9NS91 495 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 KLHL42Q9P2K6 505 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PTGDR2Q9Y5Y4 395 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 FADS2P1A8MWK0 482 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ENTPD5O75356 428 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 GPC4O75487 556 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ACOX1Q15067 660 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PCBP2Q15366 365 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PHKG1Q16816 387 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ATAT1Q5SQI0 421 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 SERPINA13PQ6UXR4 307 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 SYVN1Q86TM6 617 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 SUGP1Q8IWZ8 645 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PDPRQ8NCN5 879 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 OR56A4Q8NGH8 313 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ARRDC3Q96B67 414 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 DCUN1D1Q96GG9 259 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 FAM129BQ96TA1 746 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 KXD1Q9BQD3 176 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 ZSCAN5AQ9BUG6 496 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 TUBB1Q9H4B7 451 aa19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 NFKBIL1Q9UBC1 381 aaPredicted RBP19.54■□□□□ 0.72
PDLIM5-205ENST00000380180 PIP5K1BO14986 540 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 ESRRBO95718 433 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 S100BP04271 92 aaPredicted RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 CBSLP0DN79 551 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 EZRP15311 586 aaKnown RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 PSMC3P17980 439 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 AOAHP28039 575 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 CBSP35520 551 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 CYLC2Q14093 348 aaPredicted RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 RBBP7Q16576 425 aa19.53■□□□□ 0.72
PDLIM5-205ENST00000380180 ULK2Q8IYT8 1036 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms