RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RAB11FIP2Q7L804 512 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 OSTM1Q86WC4 334 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LRRC6Q86X45 466 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KATNAL2Q8IYT4 538 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SYNPOQ8N3V7 929 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ZDHHC1Q8WTX9 485 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ULBP3Q9BZM4 244 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LRIT1Q9P2V4 623 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF180Q9UJW8 692 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 GTF2A1LQ9UNN4 478 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KCNE2Q9Y6J6 123 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KRT87PA6NCN2 255 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 H3BMM5 538 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 FLRT2O43155 660 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CCDC22O60826 627 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SUPT7LO94864 414 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PIGNO95427 931 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ENGP17813 658 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 DGKAP23743 735 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SPRP35270 261 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ADARP55265 1226 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 COPZ1P61923 177 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 BIKQ13323 160 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SIX1Q15475 284 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PTPRNQ16849 979 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MYLK3Q32MK0 819 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SLC25A52Q3SY17 297 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 RTL10Q7L3V2 364 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TRABD2AQ86V40 505 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 WDR36Q8NI36 951 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 HTR3CQ8WXA8 447 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ATL1Q8WXF7 558 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF75CPQ92670 426 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 USP7Q93009 1102 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MTBPQ96DY7 904 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CLPTM1LQ96KA5 538 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SNRNP25Q9BV90 132 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 OCEL1Q9H607 264 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MANSC1Q9H8J5 431 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 GPAMQ9HCL2 828 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PDP2Q9P2J9 529 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CA5BQ9Y2D0 317 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MYH11P35749 1972 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 RP1P56715 2156 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 A0A096LPK6 155 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TRIM49D1C9J1S8 452 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ACOT7O00154 380 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 HAS3O00219 553 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 GRID2O43424 1007 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TP53P04637 393 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 UMPSP11172 480 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ACADSP16219 412 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 FUT4P22083 530 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ITGB8P26012 769 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MC4RP32245 332 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 AFF1P51825 1210 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 C1QBPQ07021 282 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MPP3Q13368 585 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF470Q6ECI4 717 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TCEAL6Q6IPX3 200 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 OLFML1Q6UWY5 402 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 NPNTQ6UXI9 565 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MON1BQ7L1V2 547 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 OR5M3Q8NGP4 307 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 OR2I1PQ8NGU4 316 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PYDC1Q8WXC3 89 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TCEAL3Q969E4 200 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SLC22A18Q96BI1 424 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PPP1R36Q96LQ0 422 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM109Q9BVC6 243 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 DEFB126Q9BYW3 111 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ZDHHC5Q9C0B5 715 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 FBXO6Q9NRD1 293 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 RAPGEFL1Q9UHV5 662 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 GNPTGQ9UJJ9 305 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TRHDEQ9UKU6 1024 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PTRH2Q9Y3E5 179 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 OR5K4A6NMS3 321 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 H3BNH8 94 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 RAD51BO15315 384 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PEX1O43933 1283 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PEX11AO75192 247 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CYP17A1P05093 508 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MPOP05164 745 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 UNGP13051 313 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 NELFEP18615 380 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 FOLR3P41439 243 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MAPKAPK2P49137 400 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 RRADP55042 308 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SLC34A1Q06495 639 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 DMPKQ09013 629 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MORF4L2Q15014 288 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 MAPKAPK3Q16644 382 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 FAM83EQ2M2I3 478 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms