RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CNTD1Q8N815 330 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 FATE1Q969F0 183 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 TRIB3Q96RU7 358 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 CHST8Q9H2A9 424 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 IMP3Q9NV31 184 aaKnown RBP17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 CUEDC1Q9NWM3 386 aaPredicted RBP17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 FAM8A1Q9UBU6 413 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 TMPRSS11EQ9UL52 423 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 G3BP2Q9UN86 482 aaKnown RBP17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 HEY1Q9Y5J3 304 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 ITPR2Q14571 2701 aa17.4■□□□□ 0.38
PDLIM4-202ENST00000379018 AURKAO14965 403 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 DPM1O60762 260 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 TAS2R40P59535 323 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 TMEM115Q12893 351 aaPredicted RBP17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 PDK2Q15119 407 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 RPE65Q16518 533 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 ATP13A5Q4VNC0 1218 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 LCN10Q6JVE6 187 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 DUS1LQ6P1R4 473 aaKnown RBP17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 WASH2PQ6VEQ5 465 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 FAM83HQ6ZRV2 1179 aaPredicted RBP17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 C11orf96Q7Z7L8 435 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 NT5DC3Q86UY8 548 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 MAP7D3Q8IWC1 876 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 ENDOVQ8N8Q3 282 aaKnown RBP17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 FDCSPQ8NFU4 85 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 NUDT9Q9BW91 350 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 RAB33BQ9H082 229 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 CBX8Q9HC52 389 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 MAGEE1Q9HCI5 957 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 SPO11Q9Y5K1 396 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 CENPEQ02224 2701 aa17.39■□□□□ 0.37
PDLIM4-202ENST00000379018 TLCD2A6NGC4 264 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 GPR39O43194 453 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 KRT86O43790 486 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 PMPCBO75439 489 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 TMEM63AO94886 807 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 CYP1A2P05177 515 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 KLK3P07288 261 aaPredicted RBP17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 CTSCP53634 463 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 TUBB4BP68371 445 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 HSD11B2P80365 405 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 CDK18Q07002 472 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 PPIDQ08752 370 aaKnown RBP17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 XRCC4Q13426 336 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 TUBB2AQ13885 445 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 NFE2L1Q14494 772 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 NOMO1Q15155 1222 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 KYNUQ16719 465 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 SLC6A19Q695T7 634 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 CCDC70Q6NSX1 233 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 ARMC6Q6NXE6 501 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 MAMDC2Q7Z304 686 aaPredicted RBP17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 AMZ2Q86W34 360 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 Q8NA96 180 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 SPATA22Q8NHS9 363 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 C19orf60Q96EN9 201 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 PPM1MQ96MI6 270 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 NAP1L5Q96NT1 182 aaPredicted RBP17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 FCRL4Q96PJ5 515 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 TUBB2BQ9BVA1 445 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 MLXIPLQ9NP71 852 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 HRASLS2Q9NWW9 162 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 UBP1Q9NZI7 540 aa17.38■□□□□ 0.37
PDLIM4-202ENST00000379018 OR5K3A6NET4 321 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 POP7O75817 140 aaKnown RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 CLDN1O95832 211 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 DDAH2O95865 285 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 DCTP40126 519 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 IFI35P80217 286 aaPredicted RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 TYRO3Q06418 890 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 LAMB3Q13751 1172 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 NR6A1Q15406 480 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 OOSP2Q86WS3 158 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 RHOT1Q8IXI2 618 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 D2HGDHQ8N465 521 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 RBMXL3Q8N7X1 1067 aaKnown RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 SLC38A9Q8NBW4 561 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 NAT14Q8WUY8 206 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 CLIP3Q96DZ5 547 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 IMP4Q96G21 291 aaKnown RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 TLR10Q9BXR5 811 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 KCND1Q9NSA2 647 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 CTTNBP2NLQ9P2B4 639 aa17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 NFKBIL1Q9UBC1 381 aaPredicted RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 ERRFI1Q9UJM3 462 aaPredicted RBP17.37■□□□□ 0.37
PDLIM4-202ENST00000379018 LRRD1A4D1F6 860 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 OR6C74A6NCV1 312 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 F5H423 210 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 LCA5LO95447 670 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 LPOP22079 712 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 PPP2R5EQ16537 467 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 TMTC4Q5T4D3 741 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms