RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 SYN1P17600 705 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 IL4RP24394 825 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 DGKGP49619 791 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 AQP4P55087 323 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 USP46P62068 366 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 PIK3R6Q5UE93 754 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 FAM46CQ5VWP2 391 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 OFCC1Q8IZS5 231 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 DENND1AQ8TEH3 1009 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 ZNF599Q96NL3 588 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 SUV39H2Q9H5I1 410 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 FADS3Q9Y5Q0 445 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 LRP5O75197 1615 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MAP3K13O43283 966 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 COCHO43405 550 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MAFKO60675 156 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 DNAJA2O60884 412 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 INTS11Q5TA45 600 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TMEM220Q6QAJ8 160 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 ADCY4Q8NFM4 1077 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 PRR11Q96HE9 360 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 KCNA7Q96RP8 456 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 OSBPL11Q9BXB4 747 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TFB2MQ9H5Q4 396 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MCM8Q9UJA3 840 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 PRAMEF11O60813 436 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 CKMT2P17540 419 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 ADSLP30566 484 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 CAP1Q01518 475 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MOGSQ13724 837 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MORN1Q5T089 497 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 CPTPQ5TA50 214 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TRIM69Q86WT6 500 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TSEN34Q9BSV6 310 aaKnown RBP13.04□□□□□ -0.32
NPHP4-203ENST00000378169 TPRKBQ9Y3C4 175 aa13.04□□□□□ -0.32
NPHP4-203ENST00000378169 LYNP07948 512 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CCL5P13501 91 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CTSEP14091 401 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 ITGAXP20702 1163 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CENPAP49450 140 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 ABRAXAS1Q6UWZ7 409 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 FLCNQ8NFG4 579 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 KLK6Q92876 244 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CXorf40BQ96DE9 158 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 FAM192AQ9GZU8 254 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CNOT6Q9ULM6 557 aaKnown RBP13.03□□□□□ -0.32
NPHP4-203ENST00000378169 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 WNT6Q9Y6F9 365 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 OCM2P0CE71 109 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-203ENST00000378169 TNNI3P19429 210 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CXCR2P25025 360 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CASP12Q6UXS9 341 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 C17orf64Q86WR6 236 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 LIX1Q8N485 282 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 ZMIZ2Q8NF64 920 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 OR10G6Q8NH81 332 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 PER2O15055 1255 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CLTBP09497 229 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CYBAP13498 195 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 ZNF37AP17032 561 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-203ENST00000378169 MAGEA11P43364 429 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 CCNHP51946 323 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-203ENST00000378169 STC1P52823 247 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 PRKCQQ04759 706 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 TMEM214Q6NUQ4 689 aaKnown RBP13.03□□□□□ -0.32
NPHP4-203ENST00000378169 SNX20Q7Z614 316 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 TBC1D21Q8IYX1 336 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 MAGEL2Q9UJ55 1249 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 SH3GLB1Q9Y371 365 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 INSL5Q9Y5Q6 135 aa13.03□□□□□ -0.32
NPHP4-203ENST00000378169 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.32
NPHP4-203ENST00000378169 ZBTB11O95625 1053 aaPredicted RBP13.02□□□□□ -0.32
NPHP4-203ENST00000378169 ANXA4P09525 319 aaPredicted RBP13.02□□□□□ -0.32
NPHP4-203ENST00000378169 COL6A1P12109 1028 aa13.02□□□□□ -0.32
NPHP4-203ENST00000378169 MAT2AP31153 395 aaKnown RBP13.02□□□□□ -0.32
NPHP4-203ENST00000378169 ARSDP51689 593 aa13.02□□□□□ -0.32
NPHP4-203ENST00000378169 NR1H2P55055 460 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms