RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ISPDA4D126 451 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GSTM1P09488 218 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GRK4P32298 578 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 KIR3DL1P43629 444 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 MAPK9P45984 424 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ARPC4P59998 168 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 BOP1Q14137 746 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NPTX1Q15818 432 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 FIBCD1Q8N539 461 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 LRRC17Q8N6Y2 441 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SLC38A2Q96QD8 506 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CGREF1Q99674 301 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ACBD6Q9BR61 282 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 IPPKQ9H8X2 491 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CYTH4Q9UIA0 394 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 U3KQV3 271 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 A0A1W2PQH9 124 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TNFRSF11BO00300 401 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HAT1O14929 419 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ESR1P03372 595 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HTR1EP28566 365 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SEPHS1P49903 392 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ACLYP53396 1101 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GNA13Q14344 377 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NOL9Q5SY16 702 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TREML2Q5T2D2 321 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 LCN8Q6JVE9 175 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM135Q86UB9 458 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SORT1Q99523 831 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 RPF2Q9H7B2 306 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PDLIM7Q9NR12 457 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GDAP2Q9NXN4 497 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 KCTD5Q9NXV2 234 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 STX16O14662 325 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HLA-DQB2P05538 268 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HOXD10P28358 340 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NDUFV1P49821 464 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 MTPNP58546 118 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 MYBPC1Q00872 1141 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GALNT1Q10472 559 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PLD1Q13393 1074 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF181Q2M3W8 571 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 DPY19L1Q2PZI1 675 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SDE2Q6IQ49 451 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 OGFOD2Q6N063 350 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CYP20A1Q6UW02 462 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CLEC20AQ6ZU45 233 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 GPC2Q8N158 579 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 OR4K2Q8NGD2 314 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HMCESQ96FZ2 354 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 DERL2Q9GZP9 239 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF624Q9P2J8 865 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ERN1O75460 977 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CATP04040 527 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 HSD17B1P14061 328 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CD36P16671 472 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 LMO2P25791 158 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 YAP1P46937 504 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CYP4F2P78329 520 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TARBP2Q15633 366 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TECRLQ5HYJ1 363 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 LCN1P1Q5VSP4 162 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PARP8Q8N3A8 854 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TXNDC5Q8NBS9 432 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 WDR36Q8NI36 951 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PIH1D2Q8WWB5 315 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF597Q96LX8 424 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NPY6RQ99463 290 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PIGVQ9NUD9 493 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NEMP2A6NFY4 417 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 G3V2L1 256 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 BTN3A3O00478 584 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CAPN1P07384 714 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 ENO2P09104 434 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PAICSP22234 425 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 PTGER3P43115 390 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CD97P48960 835 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 LILRA4P59901 499 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 TEAD4Q15561 434 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SAPCD2Q86UD0 394 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 RANBP9Q96S59 729 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 CCDC177Q9NQR7 707 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 EBF1Q9UH73 591 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 EIF2B4Q9UI10 523 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
PCDH9-202ENST00000377865 NR2E3Q9Y5X4 410 aa8.67□□□□□ -1.02
PCDH9-202ENST00000377865 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
PCDH9-202ENST00000377865 J3QRK9 145 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 FBP2O00757 339 aa8.66□□□□□ -1.02
PCDH9-202ENST00000377865 STX11O75558 287 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms