RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DRG2P55039 364 aaKnown RBP16.52■□□□□ 0.24
HMGN4-201ENST00000377575 CXADRP78310 365 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 XIAPP98170 497 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 POU6F1Q14863 301 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 TMEM26Q6ZUK4 368 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 DET1Q7L5Y6 550 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 PLXDC1Q8IUK5 500 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 NXPE1Q8N323 547 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 TAB3Q8N5C8 712 aaPredicted RBP16.52■□□□□ 0.24
HMGN4-201ENST00000377575 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
HMGN4-201ENST00000377575 NCSTNQ92542 709 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 USP7Q93009 1102 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 DNAJC1Q96KC8 554 aaKnown RBP16.52■□□□□ 0.24
HMGN4-201ENST00000377575 TBC1D10AQ9BXI6 508 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 ZNF624Q9P2J8 865 aaPredicted RBP16.52■□□□□ 0.24
HMGN4-201ENST00000377575 PDP2Q9P2J9 529 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 ZKSCAN5Q9Y2L8 839 aa16.52■□□□□ 0.24
HMGN4-201ENST00000377575 MN1Q10571 1320 aaPredicted RBP16.51■□□□□ 0.23
HMGN4-201ENST00000377575 PIKFYVEQ9Y2I7 2098 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 OR52A4PA6NMU1 304 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 AGAP14A8MT82 685 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 H7C0S8 307 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 BRAFP15056 766 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 SLC19A1P41440 591 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 CDH17Q12864 832 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 CLN3Q13286 438 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 SNX1Q13596 522 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 GPR33Q49SQ1 333 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 BCL7AQ4VC05 210 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 SNAP47Q5SQN1 464 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 GPR155Q7Z3F1 870 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 DNAAF3Q8N9W5 541 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 STYXQ8WUJ0 223 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 COPS8Q99627 209 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
HMGN4-201ENST00000377575 PAK5Q9P286 719 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 IGSF10Q6WRI0 2623 aa16.51■□□□□ 0.23
HMGN4-201ENST00000377575 MGAT4DA6NG13 374 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 UBXN7O94888 489 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 LIPCP11150 499 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 CCL4P13236 92 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 TPH1P17752 444 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 RAB15P59190 212 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 NFE2L1Q14494 772 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 CCNG2Q16589 344 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 ZRANB3Q5FWF4 1079 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
HMGN4-201ENST00000377575 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 FAM129CQ86XR2 697 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 BEND7Q8N7W2 519 aaPredicted RBP16.5■□□□□ 0.23
HMGN4-201ENST00000377575 OR2L2Q8NH16 312 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 TAAR9Q96RI9 348 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 UBL7Q96S82 380 aaPredicted RBP16.5■□□□□ 0.23
HMGN4-201ENST00000377575 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 GRPEL1Q9HAV7 217 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 ETNK1Q9HBU6 452 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 SLC40A1Q9NP59 571 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 PIH1D1Q9NWS0 290 aaKnown RBP16.5■□□□□ 0.23
HMGN4-201ENST00000377575 FOXJ2Q9P0K8 574 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 WDR37Q9Y2I8 494 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 AHCTF1Q8WYP5 2266 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 SDK2Q58EX2 2172 aa16.5■□□□□ 0.23
HMGN4-201ENST00000377575 CACNA1GO43497 2377 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 TEX51A0A1B0GUA7 166 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 EFCAB7A8K855 629 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 B4E171 279 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 C9orf172C9J069 976 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 CCL22O00626 93 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 SUN1O94901 812 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 FGGP02679 453 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 FGF3P11487 239 aaPredicted RBP16.49■□□□□ 0.23
HMGN4-201ENST00000377575 AMD1P17707 334 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 ACRV1P26436 265 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 TSPAN7P41732 249 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 CAPZBP47756 277 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 PRLHRP49683 370 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 CACNG1Q06432 222 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 SEMA5AQ13591 1074 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 GPR18Q14330 331 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 CLCA4Q14CN2 919 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 METRNLQ641Q3 311 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 FAM83HQ6ZRV2 1179 aaPredicted RBP16.49■□□□□ 0.23
HMGN4-201ENST00000377575 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 LINC00615Q96LM1 132 aaPredicted RBP16.49■□□□□ 0.23
HMGN4-201ENST00000377575 DDA1Q9BW61 102 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 TLR10Q9BXR5 811 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 FAM96AQ9H5X1 160 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 CPNE5Q9HCH3 593 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 RAB6BQ9NRW1 208 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 WDR70Q9NW82 654 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 ZDHHC3Q9NYG2 299 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 ACSL5Q9ULC5 683 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 PCDHB11Q9Y5F2 797 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 PCDHGA3Q9Y5H0 932 aa16.49■□□□□ 0.23
HMGN4-201ENST00000377575 TRBV5-4A0A0C4DH59 114 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 HEATR9A2RTY3 570 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms