RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TBCDQ9BTW9 1192 aa17.9■□□□□ 0.46
SF1-203ENST00000377387 PAIP1Q9H074 479 aaKnown RBP17.9■□□□□ 0.46
SF1-203ENST00000377387 ADNPQ9H2P0 1102 aa17.9■□□□□ 0.46
SF1-203ENST00000377387 OLA1Q9NTK5 396 aaKnown RBP17.9■□□□□ 0.46
SF1-203ENST00000377387 RIC8BQ9NVN3 520 aa17.9■□□□□ 0.46
SF1-203ENST00000377387 MTMR11A4FU01 709 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 SNAP91O60641 907 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 PRAMEF12O95522 483 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 FCGR1AP12314 374 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 TCF3P15923 654 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 POLR2IP36954 125 aaKnown RBP17.89■□□□□ 0.46
SF1-203ENST00000377387 NUP107P57740 925 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 RFTN2Q52LD8 501 aaPredicted RBP17.89■□□□□ 0.46
SF1-203ENST00000377387 PATL1Q86TB9 770 aaKnown RBP17.89■□□□□ 0.46
SF1-203ENST00000377387 FAM86B1Q8N7N1 296 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 OR6K2Q8NGY2 324 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 PSKH2Q96QS6 385 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 C17orf80Q9BSJ5 609 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 PKD2L2Q9NZM6 624 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 LMCD1Q9NZU5 365 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 PCDH10Q9P2E7 1040 aa17.89■□□□□ 0.46
SF1-203ENST00000377387 NUP214P35658 2090 aaPredicted RBP17.89■□□□□ 0.45
SF1-203ENST00000377387 A8MX80 341 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 FOXM1Q08050 763 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 AP5B1Q2VPB7 878 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 AASDHQ4L235 1098 aaPredicted RBP17.89■□□□□ 0.45
SF1-203ENST00000377387 AARS2Q5JTZ9 985 aaKnown RBP17.89■□□□□ 0.45
SF1-203ENST00000377387 LINC01599Q8WXQ3 324 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 TDRD1Q9BXT4 1180 aaKnown RBP17.89■□□□□ 0.45
SF1-203ENST00000377387 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 ING2Q9H160 280 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 IFT80Q9P2H3 777 aaPredicted RBP17.89■□□□□ 0.45
SF1-203ENST00000377387 PATJQ8NI35 1801 aa17.89■□□□□ 0.45
SF1-203ENST00000377387 FAM234BA2RU67 622 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 H3BMQ9 156 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ACSL4O60488 711 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 RHOCP08134 193 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 SLC2A4P14672 509 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 RPL17P18621 184 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 BNIP3Q12983 259 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 PRSS55Q6UWB4 352 aaPredicted RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 SLC24A5Q71RS6 500 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 HID1Q8IV36 788 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 OR4F6Q8NGB9 312 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 PEX13Q92968 403 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 TMBIM1Q969X1 311 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 COG8Q96MW5 612 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 THUMPD3Q9BV44 507 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 LRRC3Q9BY71 257 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ZFP14Q9HCL3 533 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 UTS2RQ9UKP6 389 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ANKRD66B4E2M5 251 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 NOBOXO60393 691 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 IGLV3-27P01718 113 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 NR4A1P22736 598 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 HSPA7P48741 367 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 EMX2Q04743 252 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 PTGR1Q14914 329 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ABRAXAS2Q15018 415 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 CYP20A1Q6UW02 462 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 PTRH1Q86Y79 214 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 BDH2Q9BUT1 245 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 SMURF2Q9HAU4 748 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 STX16O14662 325 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 DFNA5O60443 496 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 SHMT2P34897 504 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 EEFSECP57772 596 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 PIGFQ07326 219 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 MBTPS1Q14703 1052 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 DUS1LQ6P1R4 473 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 ALDH16A1Q8IZ83 802 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 OR10Q1Q8NGQ4 319 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 CLHC1Q8NHS4 586 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 MTFMTQ96DP5 389 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 NUSAP1Q9BXS6 441 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 BRINP2Q9C0B6 783 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 MAGEH1Q9H213 219 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 NSUN3Q9H649 340 aaKnown RBP17.88■□□□□ 0.45
SF1-203ENST00000377387 PCDHB9Q9Y5E1 797 aa17.88■□□□□ 0.45
SF1-203ENST00000377387 ALPIP09923 528 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 RPL38P63173 70 aaKnown RBP17.87■□□□□ 0.45
SF1-203ENST00000377387 HMGCS1Q01581 520 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 TRAF2Q12933 501 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 IRAK1BP1Q5VVH5 260 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
SF1-203ENST00000377387 TAS1R1Q7RTX1 841 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 ZFAND4Q86XD8 727 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 CLDN19Q8N6F1 224 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 HIPK3Q9H422 1215 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 NTN4Q9HB63 628 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 FARSBQ9NSD9 589 aaKnown RBP17.87■□□□□ 0.45
SF1-203ENST00000377387 DNAAF2Q9NVR5 837 aaKnown RBP17.87■□□□□ 0.45
SF1-203ENST00000377387 VNN2O95498 520 aa17.87■□□□□ 0.45
SF1-203ENST00000377387 MYCP01106 439 aaPredicted RBP17.87■□□□□ 0.45
SF1-203ENST00000377387 HNRNPCP07910 306 aaKnown RBP eCLIP17.87■□□□□ 0.451e-11■□□□□ 8.2
SF1-203ENST00000377387 IL7RP16871 459 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms