RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SNX20	Q7Z614	316 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	LCA5	Q86VQ0	697 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	TMEM145	Q8NBT3	493 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	SETD7	Q8WTS6	366 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	TSSK3	Q96PN8	268 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	SERPINE1	P05121	402 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	IDS	P22304	550 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	NUDT2	P50583	147 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	NFE2L1	Q14494	772 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	ZNF77	Q15935	545 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	ACSBG2	Q5FVE4	666 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	HIST2H2AA3	Q6FI13	130 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	SUGP1	Q8IWZ8	645 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	ZCCHC10	Q8TBK6	192 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	LMLN	Q96KR4	655 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	GATA5	Q9BWX5	397 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	TBC1D30	Q9Y2I9	924 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	MTCH2	Q9Y6C9	303 aa		13.37	□□□□□ -0.27
DDR1-225	ENST00000376568	ERAL1	O75616	437 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	CYP4F3	Q08477	520 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	TCEAL1	Q15170	157 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	ADGRD1	Q6QNK2	874 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	ALYREF	Q86V81	257 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	CILP2	Q8IUL8	1156 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	NKAP	Q8N5F7	415 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	LCN9	Q8WX39	176 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	HSPA12B	Q96MM6	686 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	THUMPD3	Q9BV44	507 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	PARVB	Q9HBI1	364 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	L3MBTL1	Q9Y468	752 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	GPC1	P35052	558 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	NSG1	P42857	185 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	PLA2G16	P53816	162 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	SPATA24	Q86W54	205 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	DCAKD	Q8WVC6	231 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	SHD	Q96IW2	340 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	OR4F21	O95013	312 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	ZDHHC11B	P0C7U3	371 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	GRK3	P35626	688 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	CSNK1E	P49674	416 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	WDR4	P57081	412 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	SEMA3B	Q13214	749 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	AURKC	Q9UQB9	309 aa		13.36	□□□□□ -0.27
DDR1-225	ENST00000376568	CNTF	P26441	200 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	FOXM1	Q08050	763 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	TMEM198	Q66K66	360 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	LRGUK	Q96M69	825 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	KCNA7	Q96RP8	456 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	OLFM1	Q99784	485 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	SLC22A14	Q9Y267	594 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	MGAT4D	A6NG13	374 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	ATP5F1	P24539	256 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	AKT2	P31751	481 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	CDKN2D	P55273	166 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	HMGCS1	Q01581	520 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	UBAP2L	Q14157	1087 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	TSNAXIP1	Q2TAA8	658 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	IER5L	Q5T953	404 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	MAGEB18	Q96M61	343 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	PHF7	Q9BWX1	381 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	IPPK	Q9H8X2	491 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	TCF7L2	Q9NQB0	619 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	LHX3	Q9UBR4	397 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	PLLP	Q9Y342	182 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568		K7ESM1	405 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	DCTN3	O75935	186 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	UBOX5	O94941	541 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	GSC	P56915	257 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	RPL38	P63173	70 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	HYAL2	Q12891	473 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	FAM219B	Q5XKK7	198 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	ATOH1	Q92858	354 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	NSUN5	Q96P11	429 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	MGME1	Q9BQP7	344 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	TBCD	Q9BTW9	1192 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	SLC17A9	Q9BYT1	436 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	TTYH1	Q9H313	450 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	PRSS16	Q9NQE7	514 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	USH1C	Q9Y6N9	552 aa		13.35	□□□□□ -0.27
DDR1-225	ENST00000376568	GNGT2	O14610	69 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	GRID2	O43424	1007 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ITM2A	O43736	263 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	H2AFY	O75367	372 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	FAM107A	O95990	144 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	FOXN2	P32314	431 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	CSTF1	Q05048	431 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ADAM15	Q13444	863 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	C1orf146	Q5VVC0	180 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	MREG	Q8N565	214 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	KCNN1	Q92952	543 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	SKA1	Q96BD8	255 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	EBPL	Q9BY08	206 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TRIM33	Q9UPN9	1127 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	IRAK3	Q9Y616	596 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	KANSL1L	A0AUZ9	987 aa		13.34	□□□□□ -0.27

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