RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZNF222Q9UK12 451 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 RNASEH2AO75792 299 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ANGPTL1O95841 491 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 TAB1Q15750 504 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 RFX4Q33E94 735 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 COLEC12Q5KU26 742 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PCSK9Q8NBP7 692 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 MYOCQ99972 504 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 MUC13Q9H3R2 512 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 IFT80Q9P2H3 777 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 EVLQ9UI08 416 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 C9P02748 559 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ALPIP09923 528 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 RHOQP17081 205 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 SFSWAPQ12872 951 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 EPS8Q12929 822 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GRB7Q14451 532 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GANABQ14697 944 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PAFAH1B3Q15102 231 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 MEP1AQ16819 746 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ITIH5Q86UX2 942 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 SERPINA9Q86WD7 417 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PHF10Q8WUB8 498 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 STYXQ8WUJ0 223 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GPR22Q99680 433 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 STMN3Q9NZ72 180 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 OR10H3O60404 316 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 CDH1P12830 882 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PRKACGP22612 351 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 NOVP48745 357 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ERAP2Q6P179 960 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 BBS4Q96RK4 519 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 YME1L1Q96TA2 773 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 MATN2O00339 956 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 HTRA2O43464 458 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GPIP06744 558 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 AZGP1P25311 298 aaKnown RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 IL12RB1P42701 662 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 RAB39AQ14964 217 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GPAT3Q53EU6 434 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PRSS55Q6UWB4 352 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 FAM131AQ6UXB0 335 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 CHST15Q7LFX5 561 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-202ENST00000375340 MON1AQ86VX9 555 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 CHCHD6Q9BRQ6 235 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 PRRG3Q9BZD7 231 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 GLI3P10071 1580 aa6.47□□□□□ -1.37
SMC1A-202ENST00000375340 INSIG1O15503 277 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 PKMP14618 531 aaKnown RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 HOXB8P17481 243 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 RXRGP48443 463 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 INCA1Q0VD86 236 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ARHGEF6Q15052 776 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 TAF1AQ15573 450 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 CPTPQ5TA50 214 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 MFSD4BQ5TF39 518 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 P2RY8Q86VZ1 359 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 RBFAQ8N0V3 343 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 KBTBD8Q8NFY9 601 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ATG10Q9H0Y0 220 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 MEAF6Q9HAF1 191 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ABCB9Q9NP78 766 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 CRTAC1Q9NQ79 661 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ANGPT4Q9Y264 503 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 NEDD8-MDP1E9PL57 170 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 IL6P05231 212 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 RPL10P27635 214 aaKnown RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 DGKEP52429 567 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ADAM17P78536 824 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 C18orf21Q32NC0 220 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 ZBED5Q49AG3 693 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 LYPLAL1Q5VWZ2 237 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 KIAA0930Q6ICG6 404 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 USP50Q70EL3 339 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-202ENST00000375340 KRT73Q86Y46 540 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 PNPLA1Q8N8W4 532 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 SORT1Q99523 831 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 TRMOQ9BU70 441 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 RBPJLQ9UBG7 517 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 PADI3Q9ULW8 664 aa6.46□□□□□ -1.37
SMC1A-202ENST00000375340 SNTNA6NMZ2 147 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 BTN3A3O00478 584 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 POLR2EP19388 210 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CDK9P50750 372 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GPR180Q86V85 440 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 TTC29Q8NA56 475 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 ASZ1Q8WWH4 475 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OMA1Q96E52 524 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 KLHL32Q96NJ5 620 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SMOQ99835 787 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 TOR3AQ9H497 397 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 MRPL17Q9NRX2 175 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 FAM234BA2RU67 622 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 BOLA2-SMG1P6H3BVE0 249 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms