RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TMEM134Q9H6X4 195 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 SALL1Q9NSC2 1324 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 ZBTB11O95625 1053 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-203ENST00000374695 MAPK3P27361 379 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-203ENST00000374695 ANTXR2P58335 489 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 COLEC12Q5KU26 742 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 ADAMTS15Q8TE58 950 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 TBATAQ96M53 351 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 NPAS2Q99743 824 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 TCF25Q9BQ70 676 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 SSU72Q9NP77 194 aaKnown RBP8.3□□□□□ -1.08
HSPG2-203ENST00000374695 ZDHHC4Q9NPG8 344 aa8.3□□□□□ -1.08
HSPG2-203ENST00000374695 H7C2Y5 167 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PER2O15055 1255 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ELFN1P0C7U0 828 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PABPC4LP0CB38 370 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CSTF1Q05048 431 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 BNIP1Q12981 228 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PHF13Q86YI8 300 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 LINC00471Q8N535 108 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TMEM161BQ8NDZ6 487 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CALCAP01258 141 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 GNAZP19086 355 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SLC18A1P54219 525 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TMBIM6P55061 237 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PAN2Q504Q3 1202 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 DNAJB3Q8WWF6 145 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF570Q96NI8 536 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ARHGEF4Q9NR80 690 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 FBXO6Q9NRD1 293 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 KCTD5Q9NXV2 234 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CHD5Q8TDI0 1954 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 NME6O75414 186 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CLDN9O95484 217 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF155Q12901 538 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SLC39A12Q504Y0 691 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CERS6Q6ZMG9 384 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 FBXO33Q7Z6M2 555 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 OR10H4Q8NGA5 316 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 OSMRQ99650 979 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 HTATIP2Q9BUP3 242 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 GPSM3Q9Y4H4 160 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PDYNP01213 254 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 LAMP2P13473 410 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ACVR2AP27037 513 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PRKCIP41743 596 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TROAPQ12815 778 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 OR8D1Q8WZ84 308 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PFDN5Q99471 154 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SGK2Q9HBY8 427 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CUEDC1Q9NWM3 386 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PIK3C2BO00750 1634 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 RP2O75695 350 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 AGR2O95994 175 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ATP5A1P25705 553 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PLEKHO2Q8TD55 490 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 S100PBPQ96BU1 408 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SMURF1Q9HCE7 757 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SPATA31A3Q5VYP0 1347 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SPTLC1O15269 473 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ENTPD6O75354 484 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SLC9A3P48764 834 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 MAB21L1Q13394 359 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 BRMS1LQ5PSV4 323 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF227Q86WZ6 799 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 GHDCQ8N2G8 530 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.082e-6■■■□□ 17
HSPG2-203ENST00000374695 TRPV4Q9HBA0 871 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 STARD7Q9NQZ5 370 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 CACNA1SQ13698 1873 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 DET1Q7L5Y6 550 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 KCTD7Q96MP8 289 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PSKH2Q96QS6 385 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 FTHL17Q9BXU8 183 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TMEM39BQ9GZU3 492 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 RABL2AQ9UBK7 228 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 RABL2BQ9UNT1 228 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 KIAA1217Q5T5P2 1943 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF701M0R085 212 aaPredicted RBP8.29□□□□□ -1.08
HSPG2-203ENST00000374695 GJA1P17302 382 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TPSB2P20231 275 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 SSR2P43308 183 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 MVKQ03426 396 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 TPSAB1Q15661 275 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 KCNK18Q7Z418 384 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ANKRD23Q86SG2 305 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 DEFB106AQ8N104 65 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 NATD1Q8N6N6 113 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 COPS8Q99627 209 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 ABCB9Q9NP78 766 aa8.29□□□□□ -1.08
HSPG2-203ENST00000374695 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms