RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 KMT2EQ8IZD2 1858 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 RYBPQ8N488 228 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 NMD3Q96D46 503 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MRPL57Q9BQC6 102 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MGME1Q9BQP7 344 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 POLR1EQ9GZS1 481 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 ZNHIT2Q9UHR6 403 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PADI4Q9UM07 663 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SLC8A2Q9UPR5 921 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 ARHGAP10A1A4S6 786 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 CHURC1-FNTBB4DL54 471 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 HDAC3O15379 428 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 INSIG1O15503 277 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 DLX3O60479 287 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 CXCL12P48061 93 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PSMD7P51665 324 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PLOD1Q02809 727 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SLC9B1Q4ZJI4 515 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SFT2D3Q587I9 215 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 EOGTQ5NDL2 527 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SEL1L3Q68CR1 1132 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 DPY19L3Q6ZPD9 716 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TRMT11Q7Z4G4 463 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 CROCCP3Q8IVE0 287 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 C1orf210Q8IVY1 113 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MAML2Q8IZL2 1156 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PGBD3Q8N328 593 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 DTWD2Q8NBA8 298 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 OR13J1Q8NGT2 312 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 OR2A12Q8NGT7 310 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 FNDC8Q8TC99 324 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 GRIN3AQ8TCU5 1115 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TSPAN17Q96FV3 270 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 FEM1CQ96JP0 617 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 OMDQ99983 421 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SEMA3CQ99985 751 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 MRPS26Q9BYN8 205 aaKnown RBP14.13□□□□□ -0.15
HMGA1-203ENST00000374116 TCF7L2Q9NQB0 619 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 XPR1Q9UBH6 696 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 SARDHQ9UL12 918 aa14.13□□□□□ -0.15
HMGA1-203ENST00000374116 PLK4O00444 970 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 LDB2O43679 373 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 NPHS1O60500 1241 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 CCNT2O60583 730 aaKnown RBP14.12□□□□□ -0.15
HMGA1-203ENST00000374116 ATG13O75143 517 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 PIGNO95427 931 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 TFAP2AP05549 437 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 CTSLP07711 333 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 MPSTP25325 297 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 SERPINB5P36952 375 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 NAGLUP54802 743 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 DNAJB13P59910 316 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 RHOAP61586 193 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 ACVR1Q04771 509 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 DLG1Q12959 904 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 ARL13AQ5H913 290 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-203ENST00000374116 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 DHRS4L2Q6PKH6 230 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 MMAAQ8IVH4 418 aaKnown RBP14.12□□□□□ -0.15
HMGA1-203ENST00000374116 FRMD1Q8N878 549 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 MDGA1Q8NFP4 955 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 NSMCE3Q96MG7 304 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 PSKH2Q96QS6 385 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 TRIB3Q96RU7 358 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 CINPQ9BW66 212 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-203ENST00000374116 ZNF696Q9H7X3 374 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 LHX3Q9UBR4 397 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 INVSQ9Y283 1065 aa14.12□□□□□ -0.15
HMGA1-203ENST00000374116 C15orf38-AP3S2A0A0A6YYH1 394 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 EDDM13A0A1B0GTR0 161 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 K7ESF4 209 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 LAMTOR5O43504 91 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 E2F6O75461 281 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 OR6B1O95007 311 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CHRNGP07510 517 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 HNRNPCP07910 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 GABRG2P18507 467 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 NDUFV2P19404 249 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 TFEBP19484 476 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CR2P20023 1033 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CSTF1Q05048 431 aaKnown RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 BTKQ06187 659 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ZNF460Q14592 562 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 STARD3Q14849 445 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 FAM83EQ2M2I3 478 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 C1orf146Q5VVC0 180 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 RBM44Q6ZP01 1051 aaKnown RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ARPINQ7Z6K5 226 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 MAPK15Q8TD08 544 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 HEXDCQ8WVB3 486 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 RLN3Q8WXF3 142 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 PEX13Q92968 403 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ZDHHC6Q9H6R6 413 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 RAPGEFL1Q9UHV5 662 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms