RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 OR5K1Q8NHB7 308 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 QRFPRQ96P65 431 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 ZNF99A8MXY4 864 aaPredicted RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 QSOX1O00391 747 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 ECI2O75521 394 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 SERPINA1P01009 418 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 KCNE1P15382 129 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 CORO1AP31146 461 aaKnown RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 OGFRL1Q5TC84 451 aaPredicted RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 PTCHD4Q6ZW05 846 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 LIN28AQ9H9Z2 209 aaKnown RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 ATP6V1HQ9UI12 483 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 PIPSLA2A3N6 862 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 CCDC182A6NF36 153 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 TGM3Q08188 693 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 SMARCB1Q12824 385 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 DNAJC11Q9NVH1 559 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPRU-202ENST00000373779 SPACA6W5XKT8 324 aa17.22■□□□□ 0.35
PTPRU-202ENST00000373779 UGT1A6P19224 532 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 UGT1A1P22309 533 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 UGT1A4P22310 534 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 UGT1A3P35503 534 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 UGT1A5P35504 534 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 UGT2B15P54855 530 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ELP6Q0PNE2 266 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 SULT1C3Q6IMI6 304 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 OGFOD2Q6N063 350 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 LINGO4Q6UY18 593 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ZDHHC21Q8IVQ6 265 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 PHACTR4Q8IZ21 702 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ZNF614Q8N883 585 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 GPATCH1Q9BRR8 931 aaKnown RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 PRR23AA6NEV1 266 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 SDHDO14521 159 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 CTSKP43235 329 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 MZT2BQ6NZ67 158 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 CLP1Q92989 425 aaKnown RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 YME1L1Q96TA2 773 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ZIM2Q9NZV7 527 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 KCNE2Q9Y6J6 123 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 KPNA3O00505 521 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 RPN2P04844 631 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 PROZP22891 400 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ATP4BP51164 291 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 BNIP3Q12983 259 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 CYP20A1Q6UW02 462 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 ANKRD46Q86W74 232 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 WDR36Q8NI36 951 aaKnown RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 C12orf43Q96C57 262 aaKnown RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 POLR3BQ9NW08 1133 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 SAGE2PA6NJ88 616 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 OR10H3O60404 316 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 POLR2EP19388 210 aaKnown RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 TTC29Q8NA56 475 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-202ENST00000373779 LRP5O75197 1615 aa17.21■□□□□ 0.35
PTPRU-202ENST00000373779 TTC24A2A3L6 582 aaPredicted RBP17.21■□□□□ 0.34
PTPRU-202ENST00000373779 LOC110117498-PIK3R3F6TDL0 507 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 DENRO43583 198 aaKnown RBP17.21■□□□□ 0.34
PTPRU-202ENST00000373779 SPAM1P38567 509 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 SMIM11AP58511 58 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 CEACAM7Q14002 265 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 CDC73Q6P1J9 531 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 MTSS1LQ765P7 747 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 SERPINA9Q86WD7 417 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 CDK20Q8IZL9 346 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 CSGALNACT1Q8TDX6 532 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 TAMM41Q96BW9 452 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 HSPBAP1Q96EW2 488 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 SMOQ99835 787 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 FEM1AQ9BSK4 669 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 TMEM165Q9HC07 324 aa17.21■□□□□ 0.34
PTPRU-202ENST00000373779 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.34
PTPRU-202ENST00000373779 WBP11Q9Y2W2 641 aaKnown RBP17.21■□□□□ 0.34
PTPRU-202ENST00000373779 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
PTPRU-202ENST00000373779 SEPHS1P49903 392 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 FAR1Q8WVX9 515 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 TMBIM1Q969X1 311 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 ZUFSPQ96AP4 578 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 CDK15Q96Q40 435 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 C1orf109Q9NX04 203 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 TOR4AQ9NXH8 423 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 GIN1Q9NXP7 522 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 FNIP2Q9P278 1114 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 RPIAP49247 311 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 KRT78Q8N1N4 520 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-202ENST00000373779 SPRTNQ9H040 489 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-202ENST00000373779 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 RNASEH2AO75792 299 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms