RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 BMP1P13497 986 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 HNF1BP35680 557 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 MAPK8P45983 427 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 RGS4P49798 205 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 CLCN2P51788 898 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 CYP4F8P98187 520 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 MYBPC1Q00872 1141 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 PAGE3Q5JUK9 113 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 LCN8Q6JVE9 175 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 SLC30A9Q6PML9 568 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 Q6ZSR9 355 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 DDX53Q86TM3 631 aaKnown RBP28.54■■■□□ 2.16
SSBP3-204ENST00000371320 TMEM125Q96AQ2 219 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 OGDHLQ9ULD0 1010 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 COL4A6Q14031 1691 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 PGM3O95394 542 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 GTF2H2Q13888 395 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 CNPY1Q3B7I2 92 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 TRIM60Q495X7 471 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 GTF2H2CQ6P1K8 395 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 MYO1HQ8N1T3 1032 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 TMEM199Q8N511 208 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 ZNF689Q96CS4 500 aaPredicted RBP28.54■■■□□ 2.16
SSBP3-204ENST00000371320 TRIM8Q9BZR9 551 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 AURKCQ9UQB9 309 aa28.54■■■□□ 2.16
SSBP3-204ENST00000371320 PLXNA4Q9HCM2 1894 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 DHRS12A0PJE2 317 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 EME2A4GXA9 379 aaPredicted RBP28.53■■■□□ 2.16
SSBP3-204ENST00000371320 CKMP06732 381 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 PSMC3P17980 439 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 GABRR2P28476 465 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 CSNK1DP48730 415 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 TBCELQ5QJ74 424 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 IL27RAQ6UWB1 636 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 ERMP1Q7Z2K6 904 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 CLDN19Q8N6F1 224 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 ANKFN1Q8N957 763 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 SLC29A1Q99808 456 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 SLC2A11Q9BYW1 496 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 ATP13A3Q9H7F0 1226 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 ZNF696Q9H7X3 374 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 PRSS21Q9Y6M0 314 aa28.53■■■□□ 2.16
SSBP3-204ENST00000371320 ANKRD12Q6UB98 2062 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 FAM234BA2RU67 622 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 OR7A17O14581 309 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SOCS5O75159 536 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SLC25A14O95258 325 aaPredicted RBP28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TRIM16O95361 564 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 BMP2P12643 396 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 UGT1A6P19224 532 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 UGT1A1P22309 533 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 UGT1A4P22310 534 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 UGT1A3P35503 534 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 UGT1A5P35504 534 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CASP2P42575 452 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 THEMIS2Q5TEJ8 643 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 IYDQ6PHW0 289 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SATL1Q86VE3 508 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SFRP1Q8N474 314 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 GOLM1Q8NBJ4 401 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SPDYE1Q8NFV5 336 aaPredicted RBP28.52■■■□□ 2.16
SSBP3-204ENST00000371320 OR4F6Q8NGB9 312 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 LKAAEAR1Q8TD35 194 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 MRPS31Q92665 395 aaKnown RBP28.52■■■□□ 2.16
SSBP3-204ENST00000371320 C17orf80Q9BSJ5 609 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 OSBPL11Q9BXB4 747 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TNKS2Q9H2K2 1166 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CFAP97Q9P2B7 532 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CLEC4EQ9ULY5 219 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 SH3BP1Q9Y3L3 701 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 ARPC2O15144 300 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TEX28O15482 410 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CLPTM1O96005 669 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 DGKAP23743 735 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 LMAN2Q12907 356 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CDKN3Q16667 212 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TIGD2Q4W5G0 525 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 RABL3Q5HYI8 236 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 LYPLAL1Q5VWZ2 237 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TPGS1Q6ZTW0 290 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 BBS7Q8IWZ6 715 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 PDPRQ8NCN5 879 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 FAM110BQ8TC76 370 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 VWCEQ96DN2 955 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 C19orf43Q9BQ61 176 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 FAM126AQ9BYI3 521 aaPredicted RBP28.52■■■□□ 2.16
SSBP3-204ENST00000371320 NSUN3Q9H649 340 aaKnown RBP28.52■■■□□ 2.16
SSBP3-204ENST00000371320 TMEM45AQ9NWC5 275 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 CRLS1Q9UJA2 301 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 ST14Q9Y5Y6 855 aa28.52■■■□□ 2.16
SSBP3-204ENST00000371320 GLYATL1P3A0A0U1RQE8 302 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 HNRNPRO43390 633 aaKnown RBP28.51■■■□□ 2.15
SSBP3-204ENST00000371320 GUCA1CO95843 209 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 IGSF6O95976 241 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 OTCP00480 354 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 BPIP17213 487 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 LAG3P18627 525 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 IL10P22301 178 aa28.51■■■□□ 2.15
SSBP3-204ENST00000371320 PSMA4P25789 261 aaKnown RBP28.51■■■□□ 2.15
SSBP3-204ENST00000371320 ACRV1P26436 265 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms