RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GMPRP36959 345 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 STARD6P59095 220 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 MRPS35P82673 323 aaKnown RBP6.96□□□□□ -1.3
USP1-202ENST00000371146 NHLH1Q02575 133 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 GRIK2Q13002 908 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 SPCS2Q15005 226 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 WSCD2Q2TBF2 565 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 ATP13A5Q4VNC0 1218 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 CMPK2Q5EBM0 449 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 ZNF362Q5T0B9 420 aaPredicted RBP6.96□□□□□ -1.3
USP1-202ENST00000371146 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 CENPUQ71F23 418 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 BEND5Q7L4P6 421 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 DENND6AQ8IWF6 608 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 UMODL1-AS1Q8N2C9 162 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 PGBD5Q8N414 524 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 CDKL2Q92772 493 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 TGM7Q96PF1 710 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 RAB17Q9H0T7 212 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 PABPC3Q9H361 631 aaKnown RBP6.96□□□□□ -1.3
USP1-202ENST00000371146 WSB2Q9NYS7 404 aaPredicted RBP6.96□□□□□ -1.3
USP1-202ENST00000371146 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
USP1-202ENST00000371146 TBC1D30Q9Y2I9 924 aa6.96□□□□□ -1.3
USP1-202ENST00000371146 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 THADAQ6YHU6 1953 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 EIF4E1BA6NMX2 242 aaKnown RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 EIF3HO15372 352 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP1-202ENST00000371146 GALR2O43603 387 aaPredicted RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 LIASO43766 372 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 MPOP05164 745 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 CELA2BP08218 269 aaPredicted RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 VCLP18206 1134 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 CDH3P22223 829 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 PPARGP37231 505 aaPredicted RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 MTTPP55157 894 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 ENPEPQ07075 957 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 PRKAA1Q13131 559 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 IRF4Q15306 451 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 DEFB110Q30KQ9 67 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 MLIPQ5VWP3 458 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SLC36A4Q6YBV0 504 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 FAM92BQ6ZTR7 304 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 PLD3Q8IV08 490 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 MPP5Q8N3R9 675 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 FBXO36Q8NEA4 188 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 OR2W6PQ8NHA6 318 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SLC25A51Q9H1U9 297 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 PISDQ9UG56 409 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 ZNF711Q9Y462 761 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 H3BM21 787 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 FFAR3O14843 346 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 GPR42O15529 346 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 KELP23276 732 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 NMBRP28336 390 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 NR2C2P49116 596 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 CYP4F2P78329 520 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 HYAL2Q12891 473 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 RAPSNQ13702 412 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SF1Q15637 639 aaKnown RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 QPCTQ16769 361 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 KIAA0895LQ68EN5 471 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 LIPIQ6XZB0 460 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SERPINA9Q86WD7 417 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 OOSP2Q86WS3 158 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 CYP4X1Q8N118 509 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 CAMKK1Q8N5S9 505 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 PYCR2Q96C36 320 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SNF8Q96H20 258 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 VPS39Q96JC1 886 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 FOPNLQ96NB1 174 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 ZNF570Q96NI8 536 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
USP1-202ENST00000371146 CCDC77Q9BR77 488 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 BOCQ9BWV1 1114 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 IL37Q9NZH6 218 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 SATB2Q9UPW6 733 aa6.95□□□□□ -1.3
USP1-202ENST00000371146 EXOC1LA0A1B0GW35 172 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LNP1A1A4G5 178 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 HEATR9A2RTY3 570 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 TNFP01375 233 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SRPRAP08240 638 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 POLR2CP19387 275 aaPredicted RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
USP1-202ENST00000371146 TYK2P29597 1187 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 ATP5DP30049 168 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 RFX3P48380 749 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MXRA7P84157 204 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 KLC1Q07866 573 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LAPTM5Q13571 262 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 NFE2L1Q14494 772 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 ZNF460Q14592 562 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 TAF11Q15544 211 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 KRT71Q3SY84 523 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 BRAT1Q6PJG6 821 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 LVRNQ6Q4G3 990 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 DGLUCYQ7Z3D6 616 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 SCAIQ8N9R8 606 aa6.94□□□□□ -1.3
USP1-202ENST00000371146 MAPK15Q8TD08 544 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms