RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ACTR1AP61163 376 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CTBP1Q13363 440 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CCNI2Q6ZMN8 369 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC26A11Q86WA9 606 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 NRROSQ86YC3 692 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 OR2L2Q8NH16 312 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 OR4C6Q8NH72 309 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CCDC97Q96F63 343 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 PANX3Q96QZ0 392 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CCM2Q9BSQ5 444 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 CDC42EP4Q9H3Q1 356 aaKnown RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 COMMD10Q9Y6G5 202 aa15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 ZFHX2Q9C0A1 2572 aaPredicted RBP15.29■□□□□ 0.04
PRPF38B-202ENST00000370022 UBA6A0AVT1 1052 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 KYNUQ16719 465 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 ERCC6LQ2NKX8 1250 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PTRHD1Q6GMV3 140 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 ZCCHC8Q6NZY4 707 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CAPN12Q6ZSI9 719 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 TRMT10CQ7L0Y3 403 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PNPLA1Q8N8W4 532 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 KLC4Q9NSK0 619 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 NINJ2Q9NZG7 142 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 NCKIPSDQ9NZQ3 722 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 TAAR2Q9P1P5 351 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PRSS21Q9Y6M0 314 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PRR19A6NJB7 356 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CELA2BP08218 269 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC2A4P14672 509 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 EP300Q09472 2414 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 DEFB133Q30KQ1 61 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 C6orf132Q5T0Z8 1188 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 SLC30A9Q6PML9 568 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 NAXDQ8IW45 347 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 FAM181AQ8N9Y4 354 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 HM13Q8TCT9 377 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 SETD7Q8WTS6 366 aaKnown RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 GLMNQ92990 594 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 FUT8Q9BYC5 575 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CCDC68Q9H2F9 335 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CAAP1Q9H8G2 361 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 RRAGDQ9NQL2 400 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 FBXO6Q9NRD1 293 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CORO1CQ9ULV4 474 aaPredicted RBP15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 KCNK6Q9Y257 313 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 CRYL1Q9Y2S2 319 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 PLEKHM1Q9Y4G2 1056 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 ST14Q9Y5Y6 855 aa15.28■□□□□ 0.04
PRPF38B-202ENST00000370022 FAM159BA6NKW6 160 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 KPNA5O15131 536 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 FFAR2O15552 330 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 PKMP14618 531 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 IDSP22304 550 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 PMS2P54278 862 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 MPP1Q00013 466 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 PLOD1Q02809 727 aaPredicted RBP15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 NAB1Q13506 487 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 WASH2PQ6VEQ5 465 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 EID2Q8N6I1 236 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM46DQ8NEK8 389 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 RHBDD1Q8TEB9 315 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 FBF1Q8TES7 1133 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 DPEP2Q9H4A9 486 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 WASH6PQ9NQA3 447 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 EVA1BQ9NVM1 165 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 CDV3Q9UKY7 258 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 PCOLCE2Q9UKZ9 415 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 ACSL5Q9ULC5 683 aa15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 V9GYY5 206 aaPredicted RBP15.27■□□□□ 0.03
PRPF38B-202ENST00000370022 OR5K4A6NMS3 321 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC30A4O14863 429 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 LIN7AO14910 233 aaPredicted RBP15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 HAUS5O94927 633 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 AHSGP02765 367 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM153BP0C7A2 387 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 MYBL2P10244 700 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 FMO4P31512 558 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 CD151P48509 253 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 RPIAP49247 311 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 VSNL1P62760 191 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 RPA4Q13156 261 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 TCEA2Q15560 299 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM153CQ494X1 144 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 ZNF789Q5FWF6 425 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 AGAP9Q5VTM2 703 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 METRNLQ641Q3 311 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 OGFOD3Q6PK18 319 aa15.26■□□□□ 0.03
PRPF38B-202ENST00000370022 ARL10Q8N8L6 244 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms