RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TRIML2Q8N7C3 387 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 LHFPL5Q8TAF8 219 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PBXIP1Q96AQ6 731 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 MRRFQ96E11 262 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 TBATAQ96M53 351 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SCPEP1Q9HB40 452 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 POPDC2Q9HBU9 364 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 COX16Q9P0S2 106 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SLC24A2Q9UI40 661 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SOX13Q9UN79 622 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 AP4S1Q9Y587 144 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGA5Q9Y5G8 931 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF469Q96JG9 3925 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 LINC00854A0A1B0GVQ3 168 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 EVPLLA8MZ36 301 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 B3GALNT1O75752 331 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF806P0C7X5 589 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF883P0CG24 379 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ADH5P11766 374 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 JUNBP17275 347 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 DDX5P17844 614 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PSMA2P25787 234 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CD70P32970 193 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 MAN1A1P33908 653 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 HTR7P34969 479 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ADCY8P40145 1251 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 TMBIM6P55061 237 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 GALNT3Q14435 633 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SMTNL2Q2TAL5 461 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 BBS9Q3SYG4 887 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 KCNT1Q5JUK3 1230 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 C1orf146Q5VVC0 180 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 FCRLBQ6BAA4 426 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 METTL2BQ6P1Q9 378 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 GALNT7Q86SF2 657 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC28AQ8IWP9 274 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 UMODL1-AS1Q8N2C9 162 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 AADATQ8N5Z0 425 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SLC15A4Q8N697 577 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CADM4Q8NFZ8 388 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ACDQ96AP0 544 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PRR11Q96HE9 360 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 FEM1CQ96JP0 617 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 LENG8Q96PV6 779 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 C19orf43Q9BQ61 176 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CALN1Q9BXU9 219 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 STN1Q9H668 368 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SLA2Q9H6Q3 261 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 OLAHQ9NV23 265 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CA14Q9ULX7 337 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SNX7Q9UNH6 387 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 AUP1Q9Y679 476 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PRSS51A0A1B0GVH4 220 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ZSCAN5BA6NJL1 495 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 B2RBV5 119 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 MYO1DO94832 1006 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CDK14O94921 469 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 SOD1P00441 154 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TCF4P15884 667 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 COILP38432 576 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 GALK2Q01415 458 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 SLC1A5Q15758 541 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TRIM16LQ309B1 348 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 BRMS1LQ5PSV4 323 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TTC39BQ5VTQ0 682 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 AFAP1L2Q8N4X5 818 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 EMC1Q8N766 993 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 BBOF1Q8ND07 529 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 RAB3IL1Q8TBN0 382 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 HPS1Q92902 700 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TRIM63Q969Q1 353 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TMIGD2Q96BF3 282 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 DUS3LQ96G46 650 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ACOX2Q99424 681 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 KLF6Q99612 283 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM120AQ9BXJ8 343 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ANKRD60Q9BZ19 345 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 NANOGQ9H9S0 305 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 C12orf4Q9NQ89 552 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TMPRSS4Q9NRS4 437 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PNPLA3Q9NST1 481 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 HACD3Q9P035 362 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGA8Q9Y5G5 932 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CSNK1G3Q9Y6M4 447 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 MAU2Q9Y6X3 613 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PRRG1O14668 218 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ZW10O43264 779 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 MED7O43513 233 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PLRG1O43660 514 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CPNE6O95741 557 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 LTFP02788 710 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 S100A6P06703 90 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 RRM2P31350 389 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 IL12RB1P42701 662 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 HARS2P49590 506 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 NDST2P52849 883 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 RPS14P62263 151 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 RPL7AP62424 266 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms