RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NPAS2Q99743 824 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 CATSPERZQ9NTU4 200 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 C2orf81A6NN90 581 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 J3QRK9 145 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 AP3B1O00203 1094 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 GPC4O75487 556 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 RB1P06400 928 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 OCM2P0CE71 109 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
TPM3-212ENST00000368533 HADHAP40939 763 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 MAGEA12P43365 314 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 THOP1P52888 689 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 HECTD2Q5U5R9 776 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 TANGO2Q6ICL3 276 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 PGM2L1Q6PCE3 622 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 LAYNQ6UX15 382 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 CLDN19Q8N6F1 224 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 TRIML2Q8N7C3 387 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 FAM156AQ8NDB6 213 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 HEXDCQ8WVB3 486 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 NXPE3Q969Y0 559 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 FBXL8Q96CD0 374 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 ADGRE3Q9BY15 652 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 EBF1Q9UH73 591 aa10.54□□□□□ -0.72
TPM3-212ENST00000368533 NCF1BA6NI72 391 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 NCF1CA8MVU1 366 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 RPP40O75818 363 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 S1PR4O95977 384 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 CYP17A1P05093 508 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 NCF1P14598 390 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 HNF1BP35680 557 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PPARGP37231 505 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 SOX9P48436 509 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 MAPK10P53779 464 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 EPHA5P54756 1037 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ECT2LQ008S8 904 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 C22orf39Q6P5X5 142 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ZNF549Q6P9A3 640 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 TMEM207Q6UWW9 146 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ADIPOR2Q86V24 386 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 CPXM2Q8N436 756 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PCDH20Q8N6Y1 951 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 PPP1R14BQ96C90 147 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 WDR41Q9HAD4 459 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 SACM1LQ9NTJ5 587 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 NCKIPSDQ9NZQ3 722 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 STK39Q9UEW8 545 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 RSL24D1Q9UHA3 163 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 HEPACAM2A8MVW5 462 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 H3BNX3 289 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 GRID2O43424 1007 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 MTX2O75431 263 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 XRCC1P18887 633 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 FSHRP23945 695 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 NRF1Q16656 503 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 FAM217AQ8IXS0 508 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 OR2AP1Q8NGE2 309 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 KLHL32Q96NJ5 620 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 CCT7Q99832 543 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 BOCQ9BWV1 1114 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 MRPL46Q9H2W6 279 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 ALG9Q9H6U8 611 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 EFCAB1Q9HAE3 211 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 SLC25A13Q9UJS0 675 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 FAM32AQ9Y421 112 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 SDK1Q7Z5N4 2213 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 A0A1W2PQ67 120 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 A6NL46 340 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 IGSF6O95976 241 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 LPOP22079 712 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 KCNA5P22460 613 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ZNF140P52738 457 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 RFTN1Q14699 578 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 DUSP6Q16828 381 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PDCD4Q53EL6 469 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 INO80DQ53TQ3 878 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 GPR65Q8IYL9 337 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 RP9Q8TA86 221 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 STYXQ8WUJ0 223 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PIH1D2Q8WWB5 315 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ISL2Q96A47 359 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 PPP1R2P1Q96PQ5 205 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 SLC30A3Q99726 388 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 MRPS26Q9BYN8 205 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 NDEL1Q9GZM8 345 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 UTP6Q9NYH9 597 aaKnown RBP10.53□□□□□ -0.72
TPM3-212ENST00000368533 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 ITM2BQ9Y287 266 aa10.53□□□□□ -0.72
TPM3-212ENST00000368533 LAMA1P25391 3075 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.52□□□□□ -0.72
TPM3-212ENST00000368533 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms