RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MGAT4DA6NG13 374 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 GOLGA8MH3BSY2 632 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 MLNP12872 115 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 VCLP18206 1134 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 XRCC1P18887 633 aaPredicted RBP22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 ARNTP27540 789 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 CASQ1P31415 396 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 SLC19A1P41440 591 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 PAFAH1B1P43034 410 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 MAGEA3P43357 314 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 SARNPP82979 210 aaKnown RBP22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 SEMA3AQ14563 771 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 CLCA4Q14CN2 919 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 ZNF658BQ4V348 819 aaPredicted RBP22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 B3GNT8Q7Z7M8 397 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 OR2L2Q8NH16 312 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 MFSD3Q96ES6 412 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 SERPINB12Q96P63 405 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 CPNE7Q9UBL6 633 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 PRSS21Q9Y6M0 314 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 FREM2Q5SZK8 3169 aa22.02■■□□□ 1.12
ECHDC1-203ENST00000368291 IGHV1OR21-1A0A087WYE8 117 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PDZK1P1A8MUH7 402 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 CFAP99D6REC4 459 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 CCDC188H7C350 402 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PROS1P07225 676 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 CD1CP29017 333 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PRAMEP78395 509 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 BIRC2Q13490 618 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 ITIH4Q14624 930 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 RTP5Q14D33 572 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 METRNLQ641Q3 311 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 CES3Q6UWW8 571 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PACS1Q6VY07 963 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 SLC9B2Q86UD5 537 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PPIL6Q8IXY8 311 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 AGGF1Q8N302 714 aaeCLIP22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 LILRA3Q8N6C8 439 aaPredicted RBP22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 OR6P1Q8NGX9 317 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 NRSN2Q9GZP1 204 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 RDH14Q9HBH5 336 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 MARCH4Q9P2E8 410 aaPredicted RBP22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 IGF2RP11717 2491 aa22.01■■□□□ 1.11
ECHDC1-203ENST00000368291 PRAMEF33A0A0G2JMD5 474 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 OR52A4PA6NMU1 304 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 DNALI1O14645 258 aaPredicted RBP22■■□□□ 1.11
ECHDC1-203ENST00000368291 CFHR1Q03591 330 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 AMZ1Q400G9 498 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 NKAIN2Q5VXU1 208 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 MDM1Q8TC05 714 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 ATXN7L3BQ96GX2 97 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 TRIM56Q9BRZ2 755 aaKnown RBP22■■□□□ 1.11
ECHDC1-203ENST00000368291 XAB2Q9HCS7 855 aaKnown RBP22■■□□□ 1.11
ECHDC1-203ENST00000368291 ASIC3Q9UHC3 531 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 PSMD13Q9UNM6 376 aa22■■□□□ 1.11
ECHDC1-203ENST00000368291 OR1I1O60431 355 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 NSG1P42857 185 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 DR1Q01658 176 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 SQSTM1Q13501 440 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 ZNF574Q6ZN55 896 aaPredicted RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 USP53Q70EK8 1073 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 JAMLQ86YT9 394 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 SLITRK4Q8IW52 837 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 KDF1Q8NAX2 398 aaPredicted RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 RUNDC3BQ96NL0 473 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 SLC38A3Q99624 504 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 NUDT22Q9BRQ3 303 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 FOXP3Q9BZS1 431 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 KCNK4Q9NYG8 393 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 C17orf113A0A1B0GUU1 675 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 KLHL33A6NCF5 533 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 TTI1O43156 1089 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 CPNE6O95741 557 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 CSF2RBP32927 897 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 ZFP36L1Q07352 338 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 FASTKD1Q53R41 847 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 LYPLAL1Q5VWZ2 237 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 ARMC3Q5W041 872 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 SYDE1Q6ZW31 735 aaPredicted RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 LDB1Q86U70 411 aaPredicted RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 HM13Q8TCT9 377 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 GRAMD1AQ96CP6 724 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 SIGLEC10Q96LC7 697 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 TRIM51Q9BSJ1 452 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 STN1Q9H668 368 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 CATSPERZQ9NTU4 200 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 DKK4Q9UBT3 224 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 FAM8A1Q9UBU6 413 aa21.99■■□□□ 1.11
ECHDC1-203ENST00000368291 PMS2P1A4D2B8 440 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 SDR42E2A6NKP2 422 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 AP2A2O94973 939 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 HOXB3P14651 431 aaPredicted RBP21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 CCKBRP32239 447 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 ARCN1P48444 511 aaKnown RBP21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 CYP4F3Q08477 520 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 RPE65Q16518 533 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 IZUMO3Q5VZ72 239 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 CERS6Q6ZMG9 384 aa21.98■■□□□ 1.11
ECHDC1-203ENST00000368291 CFAP206Q8IYR0 622 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms