RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SYBUQ9NX95 663 aa14.42□□□□□ -0.1
SF3B5-201ENST00000367569 FEZ2Q9UHY8 353 aaPredicted RBP14.42□□□□□ -0.1
SF3B5-201ENST00000367569 OR52A4PA6NMU1 304 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 ERI2A8K979 691 aaKnown RBP14.41□□□□□ -0.1
SF3B5-201ENST00000367569 CDRT15L2A8MXV6 281 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 PPFIA2O75334 1257 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 AVILO75366 819 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 GAS8O95995 478 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 F7P08709 466 aaPredicted RBP14.41□□□□□ -0.1
SF3B5-201ENST00000367569 MPSTP25325 297 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 CSF2RBP32927 897 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 HADHAP40939 763 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 PDE1BQ01064 536 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 KCNJ11Q14654 390 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 DBN1Q16643 649 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 TSTD2Q5T7W7 516 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 USP53Q70EK8 1073 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 SNX20Q7Z614 316 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 SERPINA9Q86WD7 417 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 KLHL7Q8IXQ5 586 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 LILRA3Q8N6C8 439 aaPredicted RBP14.41□□□□□ -0.1
SF3B5-201ENST00000367569 PPHLN1Q8NEY8 458 aaKnown RBP14.41□□□□□ -0.1
SF3B5-201ENST00000367569 OR13J1Q8NGT2 312 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 WDR36Q8NI36 951 aaKnown RBP14.41□□□□□ -0.1
SF3B5-201ENST00000367569 WDR48Q8TAF3 677 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 NUDT22Q9BRQ3 303 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 TMEM9Q9P0T7 183 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 APPL1Q9UKG1 709 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 TCAF1Q9Y4C2 921 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 AHCTF1Q8WYP5 2266 aa14.41□□□□□ -0.1
SF3B5-201ENST00000367569 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 GOLGA6L10A0A0M3HER8 536 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 HEATR9A2RTY3 570 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 MROH6A6NGR9 719 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 B4GAT1O43505 415 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 SGTAO43765 313 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 POP7O75817 140 aaKnown RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 TNFSF15O95150 251 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 GOT2P00505 430 aaKnown RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 F3P13726 295 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 HGFP14210 728 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 BRAFP15056 766 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 UCNP55089 124 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 HHEXQ03014 270 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CYP1B1Q16678 543 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 LDB1Q86U70 411 aaPredicted RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 C17orf82Q86X59 251 aaPredicted RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 MPP5Q8N3R9 675 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 ZNF843Q8N446 348 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 SFRP1Q8N474 314 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CLDN19Q8N6F1 224 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 GPR150Q8NGU9 434 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 STYXQ8WUJ0 223 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CPT1BQ92523 772 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 HDAC10Q969S8 669 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 DCUN1D1Q96GG9 259 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CDKN2AIPNLQ96HQ2 116 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 NAP1L3Q99457 506 aaPredicted RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 TIMM29Q9BSF4 260 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 TBC1D10AQ9BXI6 508 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 EIF2B3Q9NR50 452 aaKnown RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CHRAC1Q9NRG0 131 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 WDR37Q9Y2I8 494 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 CFAP20Q9Y6A4 193 aaKnown RBP14.4□□□□□ -0.1
SF3B5-201ENST00000367569 PRSS21Q9Y6M0 314 aa14.4□□□□□ -0.1
SF3B5-201ENST00000367569 COL6A6A6NMZ7 2263 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 CTAGE9A4FU28 777 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 ERVH48-1M5A8F1 160 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 NUDT21O43809 227 aaKnown RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 ZIC2O95409 532 aaPredicted RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 TCP1P17987 556 aaKnown RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 ACRV1P26436 265 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 NMBRP28336 390 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 FOXN2P32314 431 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 MRPS25P82663 173 aaKnown RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 SEMA3AQ14563 771 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 TAF1BQ53T94 588 aaPredicted RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 PHF19Q5T6S3 580 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 XKR5Q6UX68 686 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 NAPRTQ6XQN6 538 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 CLEC14AQ86T13 490 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 TRIM48Q8IWZ4 208 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 RCBTB1Q8NDN9 531 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 OR6P1Q8NGX9 317 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 ULK4Q96C45 1275 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 SLC38A3Q99624 504 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 COPS8Q99627 209 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 TRIM51Q9BSJ1 452 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 SEMA6CQ9H3T2 930 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 KCNK4Q9NYG8 393 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 IL1RAPL1Q9NZN1 696 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 MARCH4Q9P2E8 410 aaPredicted RBP14.39□□□□□ -0.11
SF3B5-201ENST00000367569 PIEZO2Q9H5I5 2752 aa14.39□□□□□ -0.11
SF3B5-201ENST00000367569 FLNBO75369 2602 aaKnown RBP14.38□□□□□ -0.11
SF3B5-201ENST00000367569 SETXQ7Z333 2677 aaKnown RBP14.38□□□□□ -0.11
SF3B5-201ENST00000367569 PRR19A6NJB7 356 aa14.38□□□□□ -0.11
SF3B5-201ENST00000367569 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms