RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 NIPAL1Q6NVV3 410 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 LRRC8DQ7L1W4 858 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SPATA19Q7Z5L4 167 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 GPR142Q7Z601 462 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 PLD3Q8IV08 490 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SPARTQ8N0X7 666 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SKA2Q8WVK7 121 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 TRUB1Q8WWH5 349 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 TANKQ92844 425 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 UGT2B28Q9BY64 529 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 EPS8L2Q9H6S3 715 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ACTR8Q9H981 624 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 AIG1Q9NVV5 245 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 POLR3BQ9NW08 1133 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 MTRRQ9UBK8 725 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 AFF4Q9UHB7 1163 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 CCL15-CCL14A0A0B4J2E2 113 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 KRBA1A5PL33 1030 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SCAMP3O14828 347 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 GPR39O43194 453 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 LDB2O43679 373 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 DFNA5O60443 496 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 KERAO60938 352 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 BCAS1O75363 584 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 PRKD3O94806 890 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 MATN4O95460 622 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 FADS2O95864 444 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 IL12AP29459 219 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 IDUAP35475 653 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 PIGAP37287 484 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SEPHS1P49903 392 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 MLLT10P55197 1068 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 MLLT6P55198 1093 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 ERVK-8P63133 956 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ZNF33AQ06730 810 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 TWF1Q12792 350 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 TRIM32Q13049 653 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ZNF846Q147U1 533 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 MAPKAPK3Q16644 382 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 CCL15Q16663 113 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 SULT1C3Q6IMI6 304 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 C8orf82Q6P1X6 216 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 DET1Q7L5Y6 550 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 BHLHA9Q7RTU4 235 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ANKRD46Q86W74 232 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 EID3Q8N140 333 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 OR2T11Q8NH01 316 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 PNPT1Q8TCS8 783 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 FRS2Q8WU20 508 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 EEF1AKMT1Q8WVE0 214 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ULK4Q96C45 1275 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 AURKBQ96GD4 344 aaPredicted RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 CDKN2AIPNLQ96HQ2 116 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ATOH8Q96SQ7 321 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 CGREF1Q99674 301 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 HEPHQ9BQS7 1158 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 AARSD1Q9BTE6 412 aaKnown RBP8.09□□□□□ -1.11
CD46-208ENST00000367042 RASSF1Q9NS23 344 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 TMEM9Q9P0T7 183 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 CDH7Q9ULB5 785 aa8.09□□□□□ -1.11
CD46-208ENST00000367042 ASPDHA6ND91 283 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 A8MU76 341 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 ARVCFO00192 962 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 AGRPO00253 132 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 CACNG3O60359 315 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 MLYCDO95822 493 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 FGF4P08620 206 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 STC1P52823 247 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 EEFSECP57772 596 aaKnown RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 IL2P60568 153 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 HMGCS1Q01581 520 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 FAM174BQ3ZCQ3 159 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 C6orf141Q5SZD1 244 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 IQSEC1Q6DN90 963 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 MICU2Q8IYU8 434 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 TFB2MQ9H5Q4 396 aaKnown RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 NOL6Q9H6R4 1146 aaKnown RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 KIF17Q9P2E2 1029 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 ATP11BQ9Y2G3 1177 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 ASB1Q9Y576 335 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 CNOT3O75175 753 aaKnown RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 NDUFS2O75306 463 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 EEDO75530 441 aaKnown RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 DIRAS1O95057 198 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 DLGAP3O95886 979 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 ITGB1P05556 798 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
CD46-208ENST00000367042 FSHRP23945 695 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 CRHBPP24387 322 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 HTR1BP28222 390 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 SERPINB1P30740 379 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 AKT1P31749 480 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 MAP2K4P45985 399 aa8.08□□□□□ -1.12
CD46-208ENST00000367042 CLK1P49759 484 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms