RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 K7ERQ8 282 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 COPEO14579 308 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 HTRA2O43464 458 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SMAD6O43541 496 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 LATO43561 262 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 MAGEC1O60732 1142 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 RNASEH1O60930 286 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SOCS5O75159 536 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 ZNF821O75541 412 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 FAM107AO95990 144 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 GSRP00390 522 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 ITGB2P05107 769 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 FAM87AP0C7U9 286 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SRCP12931 536 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 CRHR1P34998 444 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 CCT5P48643 541 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SNRPD1P62314 119 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 PDE1BQ01064 536 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 LRRC14Q15048 493 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 TAF1AQ15573 450 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 MBLAC2Q68D91 279 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 RGS9BPQ6ZS82 235 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 IQCHQ86VS3 1027 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 C2CD4AQ8NCU7 369 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 BLOC1S5Q8TDH9 187 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SCG3Q8WXD2 468 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 EXTL1Q92935 676 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 CHMP6Q96FZ7 201 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 PRR11Q96HE9 360 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 CABS1Q96KC9 395 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 MAGEB18Q96M61 343 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 FAM129BQ96TA1 746 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 KLF6Q99612 283 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 C19orf43Q9BQ61 176 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 RHOJQ9H4E5 214 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 UCKL1Q9NWZ5 548 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 ATXN7L1Q9ULK2 861 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 PCDHGC4Q9Y5F7 938 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ENO4A6NNW6 628 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 TRAFD1O14545 582 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 FFAR2O15552 330 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 PGLSO95336 258 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ALDOAP04075 364 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 PDHA1P08559 390 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 DHRS4L1P0CG22 281 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 DGKAP23743 735 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 CTSOP43234 321 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ETV4P43268 484 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 SERPINB8P50452 374 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ZNF140P52738 457 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 SEC24CP53992 1094 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ADPRHP54922 357 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 INHBCP55103 352 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ECT2LQ008S8 904 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 PPARDQ03181 441 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 BCL2L1Q07817 233 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 OVGP1Q12889 678 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 GRM3Q14832 879 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 SEPT7Q16181 437 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 QPCTQ16769 361 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 INSCQ1MX18 579 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ATXN7L2Q5T6C5 722 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 HHATQ5VTY9 493 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 C22orf39Q6P5X5 142 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 LVRNQ6Q4G3 990 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 USP53Q70EK8 1073 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ZC3HC1Q86WB0 502 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 LPCAT1Q8NF37 534 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 OR2AP1Q8NGE2 309 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 GPR150Q8NGU9 434 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 OR14C36Q8NHC7 312 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ATXN7L3BQ96GX2 97 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 VPS39Q96JC1 886 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 TUBGCP5Q96RT8 1024 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 GPR22Q99680 433 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 CPEB1Q9BZB8 566 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 TM6SF2Q9BZW4 377 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 VPS11Q9H270 941 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 ATP13A3Q9H7F0 1226 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 MAGEE1Q9HCI5 957 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 NLE1Q9NVX2 485 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 KCNK4Q9NYG8 393 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 DCDC2Q9UHG0 476 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 GGT7Q9UJ14 662 aa11.13□□□□□ -0.63
CSNK1E-202ENST00000366216 FBXO5Q9UKT4 447 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms