RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GPR18Q14330 331 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SEPT7Q16181 437 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 METRNLQ641Q3 311 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DARS2Q6PI48 645 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TMEM220Q6QAJ8 160 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FAM83HQ6ZRV2 1179 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TIPARPQ7Z3E1 657 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FAM129CQ86XR2 697 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GDAP1Q8TB36 358 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CCDC110Q8TBZ0 833 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 JPH3Q8WXH2 748 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TTC25Q96NG3 672 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 APOL2Q9BQE5 337 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZPBPQ9BS86 351 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZCCHC2Q9C0B9 1178 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 APMAPQ9HDC9 416 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SEMA5BQ9P283 1151 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 EPHA6Q9UF33 1036 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TMEM184BQ9Y519 407 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-202ENST00000366159 C2orf81A6NN90 581 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PDZK1P1A8MUH7 402 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 MIF4GDA9UHW6 222 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LDB2O43679 373 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PRAMEF1O95521 474 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 TYRP1P17643 537 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 VCLP18206 1134 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CDC25BP30305 580 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 MAPK9P45984 424 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CAPZBP47756 277 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 KLHL6Q8WZ60 621 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RSC1A1Q92681 617 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZNF514Q96K75 400 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LINC00615Q96LM1 132 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CTRCQ99895 268 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FERMT1Q9BQL6 677 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZNF768Q9H5H4 540 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 PACSIN2Q9UNF0 486 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-202ENST00000366159 OR2AG2A6NM03 316 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 RAD1O60671 282 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZNF189O75820 626 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 METTL18O95568 372 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 DLGAP3O95886 979 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PLA2G2AP14555 144 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LIFP15018 202 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CETN2P41208 172 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CYP4F2P78329 520 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PRPSAP1Q14558 356 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 RPE65Q16518 533 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TBR1Q16650 682 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 BCL7AQ4VC05 210 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PEX26Q7Z412 305 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TRIM48Q8IWZ4 208 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SYCE1Q8N0S2 351 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OR13C4Q8NGS5 318 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GPR150Q8NGU9 434 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OR2L2Q8NH16 312 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 EXTL1Q92935 676 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CXorf40BQ96DE9 158 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PPP1R2P1Q96PQ5 205 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KLHL3Q9UH77 587 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FEZ2Q9UHY8 353 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TCRBV7S2A1N4TA0A589 114 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KLHL33A6NCF5 533 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MGAT4DA6NG13 374 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 H7C0S8 307 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KIF1CO43896 1103 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CRTAMO95727 393 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 AMD1P17707 334 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ITGB6P18564 788 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PSMA3P25788 255 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MAP4P27816 1152 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 HALP42357 657 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GDF10P55107 478 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PDE1BQ01064 536 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KIF5AQ12840 1032 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms