RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 C2P06681 752 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 MYCLP1P12525 358 aaPredicted RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 CREB1P16220 341 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 CHRM3P20309 590 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 CSRP3P50461 194 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 RPL6Q02878 288 aaKnown RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 PDE1CQ14123 709 aaPredicted RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 ZNF460Q14592 562 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 SH2D5Q6ZV89 423 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 MTERF4Q7Z6M4 381 aaKnown RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 KRT222Q8N1A0 295 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 RASGEF1AQ8N9B8 481 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 FOXJ1Q92949 421 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 FUBP1Q96AE4 644 aaKnown RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 APOPT1Q96IL0 206 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 GPR21Q99679 349 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 OR2AG1Q9H205 316 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 EBF2Q9HAK2 575 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 GPAMQ9HCL2 828 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 SSU72Q9NP77 194 aaKnown RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 MKS1Q9NXB0 559 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 ATXN10Q9UBB4 475 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 TRMT6Q9UJA5 497 aaKnown RBP20.34■□□□□ 0.85
SHISA4-201ENST00000362011 OR1A2Q9Y585 309 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 HS3ST3A1Q9Y663 406 aa20.34■□□□□ 0.85
SHISA4-201ENST00000362011 A0A087X1B8 175 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 A0A1W2PPC4 97 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 IQCF5A8MTL0 148 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 CACNB4O00305 520 aaPredicted RBP20.33■□□□□ 0.85
SHISA4-201ENST00000362011 COPEO14579 308 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 MAP3K13O43283 966 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 SPAG7O75391 227 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 CDK14O94921 469 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 TRIM16O95361 564 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 FTH1P02794 183 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 HOXC4P09017 264 aaPredicted RBP20.33■□□□□ 0.85
SHISA4-201ENST00000362011 SLC35E2BP0CK96 405 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 HPDP32754 393 aaPredicted RBP20.33■□□□□ 0.85
SHISA4-201ENST00000362011 CLDN2P57739 230 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 TIAL1Q01085 375 aaKnown RBP eCLIP20.33■□□□□ 0.85
SHISA4-201ENST00000362011 KDM7AQ6ZMT4 941 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 GCNT7Q6ZNI0 430 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 PIM3Q86V86 326 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 LKAAEAR1Q8TD35 194 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 NAT14Q8WUY8 206 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 SGF29Q96ES7 293 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 LOXL4Q96JB6 756 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 SELENOSQ9BQE4 189 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 LGR4Q9BXB1 951 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 SARS2Q9NP81 518 aaKnown RBP20.33■□□□□ 0.85
SHISA4-201ENST00000362011 MED16Q9Y2X0 877 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 ACOT9Q9Y305 439 aa20.33■□□□□ 0.85
SHISA4-201ENST00000362011 TDRD6O60522 2096 aaKnown RBP20.33■□□□□ 0.84
SHISA4-201ENST00000362011 POM121BA6NF01 834 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 OR2AG2A6NM03 316 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 MEI4A8MW99 385 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 TOR1BO14657 336 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 SGTAO43765 313 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 GLRA3O75311 464 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 ITGB6P18564 788 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 NR1D1P20393 614 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 BCKDHBP21953 392 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 SKIV2L2P42285 1042 aaKnown RBP20.32■□□□□ 0.84
SHISA4-201ENST00000362011 PRLHRP49683 370 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 PGGT1BP53609 377 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 KIAA1024LP59773 190 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 PPP2R2AP63151 447 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 ST3GAL2Q16842 350 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 BCL7AQ4VC05 210 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 DOK6Q6PKX4 331 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 TMEM220Q6QAJ8 160 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 KYAT3Q6YP21 454 aaKnown RBP20.32■□□□□ 0.84
SHISA4-201ENST00000362011 TBC1D1Q86TI0 1168 aaPredicted RBP20.32■□□□□ 0.84
SHISA4-201ENST00000362011 BANPQ8N9N5 519 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 TMEM145Q8NBT3 493 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 FAM136AQ96C01 138 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 ZNF514Q96K75 400 aaPredicted RBP20.32■□□□□ 0.84
SHISA4-201ENST00000362011 BMFQ96LC9 184 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 TSNARE1Q96NA8 513 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 SLC13A1Q9BZW2 595 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 SYTL2Q9HCH5 934 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 KCNK9Q9NPC2 374 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 CA5BQ9Y2D0 317 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 DHRS7Q9Y394 339 aa20.32■□□□□ 0.84
SHISA4-201ENST00000362011 MAP1BP46821 2468 aaKnown RBP20.31■□□□□ 0.84
SHISA4-201ENST00000362011 A6NNZ2 444 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 PRPF4O43172 522 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHISA4-201ENST00000362011 MAGEC1O60732 1142 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 WISP3O95389 354 aaPredicted RBP20.31■□□□□ 0.84
SHISA4-201ENST00000362011 GSTA1P08263 222 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 COL6A2P12110 1019 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 ZNF8P17098 575 aaPredicted RBP20.31■□□□□ 0.84
SHISA4-201ENST00000362011 CTSCP53634 463 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 PFN3P60673 137 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 YPEL5P62699 121 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 IRF9Q00978 393 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 DEFB119Q8N690 84 aa20.31■□□□□ 0.84
SHISA4-201ENST00000362011 SIDT2Q8NBJ9 832 aaKnown RBP20.31■□□□□ 0.84
SHISA4-201ENST00000362011 CD200R1Q8TD46 325 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms