RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SNX15Q9NRS6 342 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 NOX1Q9Y5S8 564 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ATG13O75143 517 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 PRKACAP17612 351 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 TOR1AIP2Q8NFQ8 470 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 EDEM1Q92611 657 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ABCG8Q9H221 673 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 PCDH18Q9HCL0 1135 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 NFASCO94856 1347 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FAM149AA5PLN7 773 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ELFN1P0C7U0 828 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 PTPN9P43378 593 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 UFD1Q92890 307 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ZYG11BQ9C0D3 744 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 A0A0A0MRY4 1105 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 PER2O15055 1255 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 BPNT1O95861 308 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 DUPD1Q68J44 220 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 SPATA13Q96N96 652 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 TMPRSS11EQ9UL52 423 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 MAB21L2Q9Y586 359 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
SRGAP3-201ENST00000360413 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 UAP1L1Q3KQV9 507 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF527Q8NB42 609 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ILVBLA1L0T0 632 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SCN2BO60939 215 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 FGF1P05230 155 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 GJA1P17302 382 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 NADK2Q4G0N4 442 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CRTC2Q53ET0 693 aaPredicted RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 OXR1Q8N573 874 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC37A3Q8NCC5 494 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 FAM105AQ9NUU6 356 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SETBP1Q9Y6X0 1596 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 EML1O00423 815 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 MT-ND1P03886 318 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ASLP04424 464 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 AQP1P29972 269 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TSPAN5P62079 268 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 KLF10Q13118 480 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TIGD2Q4W5G0 525 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 NKD1Q969G9 470 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 C5orf34Q96MH7 638 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PPM1MQ96MI6 270 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ALG2Q9H553 416 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 OR1I1O60431 355 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TIGD6Q17RP2 521 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CPTPQ5TA50 214 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TAPBPLQ9BX59 468 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 COQ10BQ9H8M1 238 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SETD4Q9NVD3 440 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TRAF6Q9Y4K3 522 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PQBP1O60828 265 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 ACSS3Q9H6R3 686 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 TRPV2Q9Y5S1 764 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PET100P0DJ07 73 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC6A3Q01959 620 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CPSF7Q8N684 471 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PPCDCQ96CD2 204 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 PSKH2Q96QS6 385 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 NELFAQ9H3P2 528 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 RC3H2Q9HBD1 1191 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 THUMPD1Q9NXG2 353 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 WASF3Q9UPY6 502 aa13.08□□□□□ -0.32
SRGAP3-201ENST00000360413 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 GPIP06744 558 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SRCP12931 536 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 LAMP2P13473 410 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 IL12BP29460 328 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 POLR2JP52435 117 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SELENOVP59797 346 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CBLBQ13191 982 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 GRIK4Q16099 956 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SPATA19Q7Z5L4 167 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms