RNA–Protein interactions for RNA: ENST00000359984.12

CLN3-205, Transcript of CLN3, battenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-205ENST00000359984 QSOX1O00391 747 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 FPGTO14772 594 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 MAGEC1O60732 1142 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 LILRB5O75023 590 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 TSPAN12O95859 305 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 DHRS4L1P0CG22 281 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 AOAHP28039 575 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 PRLHRP49683 370 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 HHATQ5VTY9 493 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 DOK6Q6PKX4 331 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 OTOAQ7RTW8 1153 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 NKAPQ8N5F7 415 aaKnown RBP19.59■□□□□ 0.73
CLN3-205ENST00000359984 ZBTB2Q8N680 514 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 EEF1AKMT1Q8WVE0 214 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 FOXJ1Q92949 421 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 BMFQ96LC9 184 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 KLHL42Q9P2K6 505 aa19.59■□□□□ 0.73
CLN3-205ENST00000359984 F8W8V4 182 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 FTH1P02794 183 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 MYCLP1P12525 358 aaPredicted RBP19.58■□□□□ 0.73
CLN3-205ENST00000359984 AKT2P31751 481 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 IL2P60568 153 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 GTF2H3Q13889 308 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 BCL7AQ4VC05 210 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 TTC19Q6DKK2 380 aaPredicted RBP19.58■□□□□ 0.73
CLN3-205ENST00000359984 LRRC8EQ6NSJ5 796 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 FSTL5Q8N475 847 aaPredicted RBP19.58■□□□□ 0.73
CLN3-205ENST00000359984 TMEM151AQ8N4L1 468 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 SCYL1Q96KG9 808 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 TSSK1BQ9BXA7 367 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.58■□□□□ 0.73
CLN3-205ENST00000359984 PIKFYVEQ9Y2I7 2098 aa19.58■□□□□ 0.73
CLN3-205ENST00000359984 H0Y8X5 98 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 NDUFS2O75306 463 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 CD1DP15813 335 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 CCDC153Q494R4 210 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 ACSBG2Q5FVE4 666 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 TSSK4Q6SA08 328 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 TRAPPC5Q8IUR0 188 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 ZNF547Q8IVP9 402 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 LINGO1Q96FE5 620 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 ZNF514Q96K75 400 aaPredicted RBP19.58■□□□□ 0.72
CLN3-205ENST00000359984 CCM2Q9BSQ5 444 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 CAPS2Q9BXY5 557 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 DERL2Q9GZP9 239 aa19.58■□□□□ 0.72
CLN3-205ENST00000359984 PCYT1BQ9Y5K3 369 aaPredicted RBP19.58■□□□□ 0.72
CLN3-205ENST00000359984 ZBTB14O43829 449 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 HOXA6P31267 233 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 USP39Q53GS9 565 aaKnown RBP19.57■□□□□ 0.72
CLN3-205ENST00000359984 KLC3Q6P597 504 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 GCNT7Q6ZNI0 430 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 CCDC63Q8NA47 563 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 TMEM145Q8NBT3 493 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 ELMO1Q92556 727 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 CPSF2Q9P2I0 782 aaKnown RBP19.57■□□□□ 0.72
CLN3-205ENST00000359984 GPR34Q9UPC5 381 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 DMTF1Q9Y222 760 aa19.57■□□□□ 0.72
CLN3-205ENST00000359984 TMEM202A6NGA9 273 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 PRAMEF26H0Y7S4 382 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 CHUKO15111 745 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 NUAK1O60285 661 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 HOXC4P09017 264 aaPredicted RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 SBK3P0C264 359 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TFEBP19484 476 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 SERPINB4P48594 390 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 KPNA2P52292 529 aaKnown RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 PFN3P60673 137 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 ACAP2Q15057 778 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 CRTC3Q6UUV7 619 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 ISCA2Q86U28 154 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TAX1BP1Q86VP1 789 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 DEFB119Q8N690 84 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 PTERQ96BW5 349 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 PDLIM5Q96HC4 596 aaKnown RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 ORAI3Q9BRQ5 295 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 PRMT8Q9NR22 394 aaPredicted RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 IKZF3Q9UKT9 509 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 HS3ST3A1Q9Y663 406 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 WDR91A4D1P6 747 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 ERICH4A6NGS2 130 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 A6NNZ2 444 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 METTL12A8MUP2 240 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TARM1B6A8C7 271 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TK2O00142 265 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 CACNB4O00305 520 aaPredicted RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 KPNA5O15131 536 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 DGKAP23743 735 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 NUDT1P36639 197 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 IL9RQ01113 521 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 GBX1Q14549 363 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TTLL9Q3SXZ7 439 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TUBB8Q3ZCM7 444 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 TECRLQ5HYJ1 363 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 DYDC1Q8WWB3 177 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 SPACA7Q96KW9 195 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 MRPL57Q9BQC6 102 aaKnown RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 FAM126AQ9BYI3 521 aaPredicted RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 PCED1AQ9H1Q7 454 aa19.56■□□□□ 0.72
CLN3-205ENST00000359984 MRPL46Q9H2W6 279 aaKnown RBP19.56■□□□□ 0.72
CLN3-205ENST00000359984 ALG9Q9H6U8 611 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms