RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 NLRP9Q7RTR0 991 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 TAS2R42Q7RTR8 314 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 PIANPQ8IYJ0 282 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 OR10G6Q8NH81 332 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 PRR11Q96HE9 360 aaPredicted RBP16.72■□□□□ 0.27
FAM3D-201ENST00000358781 LINC00615Q96LM1 132 aaPredicted RBP16.72■□□□□ 0.27
FAM3D-201ENST00000358781 SEMA6CQ9H3T2 930 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 UCK1Q9HA47 277 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 ZNF624Q9P2J8 865 aaPredicted RBP16.72■□□□□ 0.27
FAM3D-201ENST00000358781 SLC2A6Q9UGQ3 507 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 TCAF1Q9Y4C2 921 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 ZFHX4Q86UP3 3567 aa16.72■□□□□ 0.27
FAM3D-201ENST00000358781 CCDC162PA2VCL2 907 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PMS2P1A4D2B8 440 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 KLHL33A6NCF5 533 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 MGAT4DA6NG13 374 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 AP3B1O00203 1094 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PHF2O75151 1096 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 KRT14P02533 472 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ATP1B2P14415 290 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 CSF2RBP32927 897 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 SLC19A1P41440 591 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 MAGEA6P43360 314 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PRLHRP49683 370 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 VPS41P49754 854 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 EPHA4P54764 986 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 SESN2P58004 480 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 CFHR1Q03591 330 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ACVR1Q04771 509 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 GPS1Q13098 491 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 EIF3IQ13347 325 aaKnown RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 NFE2L1Q14494 772 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 CLCA4Q14CN2 919 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 DBN1Q16643 649 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PCID2Q5JVF3 399 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PHF19Q5T6S3 580 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 METRNLQ641Q3 311 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 CCDC137Q6PK04 289 aaKnown RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ZNF574Q6ZN55 896 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 RAB11FIP2Q7L804 512 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 TRIM48Q8IWZ4 208 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 OR2L2Q8NH16 312 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 PEX13Q92968 403 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 HDAC10Q969S8 669 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ZNF778Q96MU6 729 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ZNF578Q96N58 590 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 DPYSL5Q9BPU6 564 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-201ENST00000358781 ASCL3Q9NQ33 180 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 WDR37Q9Y2I8 494 aa16.71■□□□□ 0.27
FAM3D-201ENST00000358781 IGHV5-10-1A0A0J9YXX1 117 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TCRBV7S3A2A0A539 114 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 OR51F1A6NGY5 319 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 LILRA5A6NI73 299 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 OR52A4PA6NMU1 304 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 PLD2O14939 933 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TLX3O43711 291 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 DUX1O43812 170 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 VIPP01282 170 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 HOXB3P14651 431 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 RBMS1P29558 406 aaKnown RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 FOXN2P32314 431 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 HALP42357 657 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 NPY2RP49146 381 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 FNTAP49354 379 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 ERVPABLB-1P60509 514 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 KCNJ11Q14654 390 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 SNIP1Q8TAD8 396 aaKnown RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 FGF11Q92914 225 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 AHCYL2Q96HN2 611 aaKnown RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 SLC46A1Q96NT5 459 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 IL22Q9GZX6 179 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 POT1Q9NUX5 634 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 BFARQ9NZS9 450 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 NEU2Q9Y3R4 380 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 GOT2P00505 430 aaKnown RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 MLLT3P42568 568 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 LIMK2P53671 638 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 CRADDP78560 199 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 LRRC8BQ6P9F7 803 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 FOXR1Q6PIV2 292 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 AFTPHQ6ULP2 937 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 ZNF534Q76KX8 674 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 GRK7Q8WTQ7 553 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TMEM159Q96B96 161 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 CXorf40BQ96DE9 158 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 CCDC74BQ96LY2 380 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 NAPGQ99747 312 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-201ENST00000358781 TBC1D10AQ9BXI6 508 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 EPB41L1Q9H4G0 881 aa16.7■□□□□ 0.26
FAM3D-201ENST00000358781 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms