RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CRHR1P34998 444 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 GDF10P55107 478 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 NCS1P62166 190 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 ALDH6A1Q02252 535 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 AAK1Q2M2I8 961 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 UNC5DQ6UXZ4 953 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 CFAP77Q6ZQR2 320 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 DHRSXQ8N5I4 330 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 RP9Q8TA86 221 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 MUL1Q969V5 352 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 PPP1R36Q96LQ0 422 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 MFSD14AQ96MC6 490 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 TWNKQ96RR1 684 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 HDHD5Q9BXW7 423 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 TLR9Q9NR96 1032 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 OAZ3Q9UMX2 235 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 TRIOBPQ9H2D6 2365 aa9.22□□□□□ -0.93
SMARCAL1-202ENST00000358207 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 IGKV6-21A0A0C4DH24 114 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 PRORSD1PA6NEY8 169 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 ACKR2O00590 384 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 PRIM2P49643 509 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 TEKQ02763 1124 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 GPR50Q13585 617 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 CBX2Q14781 532 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 PLEKHG6Q3KR16 790 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 WDR44Q5JSH3 913 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 JADE1Q6IE81 842 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 LETMD1Q6P1Q0 360 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 R3HCC1LQ7Z5L2 792 aaKnown RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 BBS7Q8IWZ6 715 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 SVOPQ8N4V2 548 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 SLC22A17Q8WUG5 538 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 FOXJ1Q92949 421 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 C18orf25Q96B23 403 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 MUS81Q96NY9 551 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 REXO4Q9GZR2 422 aaKnown RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 POLR3BQ9NW08 1133 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 TINAGQ9UJW2 476 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 BAG5Q9UL15 447 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 SNX6Q9UNH7 406 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 ANKRD6Q9Y2G4 727 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 RPH3AQ9Y2J0 694 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 CHD7Q9P2D1 2997 aa9.21□□□□□ -0.93
SMARCAL1-202ENST00000358207 TRAV20A0A0B4J274 112 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 TCAF2A6NFQ2 919 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 HMX3A6NHT5 357 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 SAGE2PA6NJ88 616 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 PRSS44E7EML9 344 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 OGTO15294 1046 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 CD19P15391 556 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 ADARB1P78563 741 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 ART3Q13508 389 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 PCLAFQ15004 111 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 ATP6AP1Q15904 470 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 PAN2Q504Q3 1202 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 TMEM198Q66K66 360 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 SYCE2Q6PIF2 218 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 MPZL3Q6UWV2 235 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 C10orf107Q8IVU9 208 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 CDH26Q8IXH8 852 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF781Q8N8C0 355 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 FNDC5Q8NAU1 212 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 WDR48Q8TAF3 677 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 LPPQ93052 612 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF578Q96N58 590 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 RPF1Q9H9Y2 349 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 CD93Q9NPY3 652 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRMT13Q9NUP7 481 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 B3GNT2Q9NY97 397 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 TAS2R9Q9NYW1 312 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 MTCH2Q9Y6C9 303 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 PLXNA4Q9HCM2 1894 aa9.21□□□□□ -0.94
SMARCAL1-202ENST00000358207 SGK1O00141 431 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SYN3O14994 580 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TPST1O60507 370 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 KRT37O76014 449 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 JUNP05412 331 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PROS1P07225 676 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 IL7RP16871 459 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ITGA2P17301 1181 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CRHBPP24387 322 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CSTF2P33240 577 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 EFNA5P52803 228 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TRAP1Q12931 704 aaKnown RBP9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 BTN1A1Q13410 526 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 SEMA3AQ14563 771 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PSMD5Q16401 504 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 BCL7AQ4VC05 210 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZNF484Q5JVG2 852 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CACHD1Q5VU97 1274 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 LRRC8DQ7L1W4 858 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 PPIL6Q8IXY8 311 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 MICU2Q8IYU8 434 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 KIAA1958Q8N8K9 716 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 AGR3Q8TD06 166 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 CNDP1Q96KN2 507 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 TEKT5Q96M29 485 aa9.2□□□□□ -0.94
SMARCAL1-202ENST00000358207 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms