RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SEC24AO95486 1093 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 PTTG1O95997 202 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 GSNP06396 782 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 ZNF37AP17032 561 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 TGFBR2P37173 567 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 NR4A2P43354 598 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 NCS1P62166 190 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 PFKFB4Q16877 469 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 TMEM179BQ7Z7N9 219 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 FSD1LQ9BXM9 530 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 WDCPQ9H6R7 721 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 MARCH4Q9P2E8 410 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 C3orf18Q9UK00 162 aa11.97□□□□□ -0.49
SMARCAL1-201ENST00000357276 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 CENPBD1B2RD01 187 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 PTGES3LE9PB15 166 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 GABRDO14764 452 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 SCO2O43819 266 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 MRPS14O60783 128 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 CD4P01730 458 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 PNPLA4P41247 253 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 CLCA4Q14CN2 919 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 STEAP3Q658P3 488 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 LAIR1Q6GTX8 287 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ENPP6Q6UWR7 440 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 USP43Q70EL4 1123 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 RAB44Q7Z6P3 723 aaPredicted RBP11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 LRRC49Q8IUZ0 686 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ATPAF2Q8N5M1 289 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 OR8J3Q8NGG0 315 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 MCOLN3Q8TDD5 553 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 SDCCAG3Q96C92 435 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ZNF560Q96MR9 790 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 NXF2Q9GZY0 626 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ATXN3LQ9H3M9 355 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 PIF1Q9H611 641 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ERVK-18Q9QC07 812 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ZNF229Q9UJW7 825 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 PLXNB2O15031 1838 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 PRMT5O14744 637 aaPredicted RBP11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 SNPHO15079 494 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ASNA1O43681 348 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 XPNPEP2O43895 674 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ADAM17P78536 824 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 MAPK11Q15759 364 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 B3GNT8Q7Z7M8 397 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 DCP2Q8IU60 420 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 TOP6BLQ8N6T0 577 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ARL10Q8N8L6 244 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 LGALS12Q96DT0 336 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 R3HDMLQ9H3Y0 253 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 NEK6Q9HC98 313 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 A3GALT2U3KPV4 340 aa11.96□□□□□ -0.49
SMARCAL1-201ENST00000357276 DFFAO00273 331 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 CST1P01037 141 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 SPNP16150 400 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ALDH4A1P30038 563 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 UGT2B10P36537 528 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 DCTP40126 519 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ARSDP51689 593 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 NKX2-5P52952 324 aaPredicted RBP11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 WNT3AP56704 352 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ACVR1Q04771 509 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 MANEALQ5VSG8 457 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ARMCX2Q7L311 632 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 CLIP4Q8N3C7 705 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ZNF548Q8NEK5 533 aaPredicted RBP11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ZMIZ2Q8NF64 920 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 OR5K1Q8NHB7 308 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 CNIH3Q8TBE1 160 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 SLC39A8Q9C0K1 460 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 ACTL8Q9H568 366 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 SPC25Q9HBM1 224 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 HEBP1Q9NRV9 189 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 RGS18Q9NS28 235 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 OPTCQ9UBM4 332 aa11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 EIF3LQ9Y262 564 aaKnown RBP11.96□□□□□ -0.5
SMARCAL1-201ENST00000357276 FAM172BPA6NC97 362 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 ANKRD28O15084 1053 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 KLK8O60259 260 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 HOXB8P17481 243 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 CXCR2P25025 360 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 MAP2K4P45985 399 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 MAP3K7CLP57077 242 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 RFX4Q33E94 735 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 PAGE2Q7Z2X7 111 aa11.95□□□□□ -0.5
SMARCAL1-201ENST00000357276 LDB1Q86U70 411 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms